Gene Shel_23900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_23900 
Symbol 
ID8396279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2649826 
End bp2650629 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content56% 
IMG OID644987137 
Productpolyketide biosynthesis O-methyltransferase 
Protein accessionYP_003144748 
Protein GI257065076 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3315] O-Methyltransferase involved in polyketide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0623089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGAAC TCAACACCGT CTCTGAAACA CTCTTCGTCC CCTTGGCCGG ACGCATCCAG 
ATAAGCCAAC AGAAGCCCAA CATACTGCAC GACGCCAAAG CCCTCGAGCT GAAATCCAGG
GTGCCTGCCG AACTGCTCAA CAAGGGCAAG CAAAGCCAAT ACACCCTGGT GGCAAGCGCA
TCGCGCGCTG CGAACCTCGA TCGCTACATC CAGACGTTCA GACTAAGGCA CCCCGATGGG
GTCATCGCCC AAATCGGATG CGGTCTGGAA ACCGCGTTCT ACCGCAACGA CGACGGATAC
GCTGTCTTCT ACGAAATAGA TCTGCCCGAG GTCATCGAAT TCCGCCGCGA AGTGCTTGGA
GAAACCGAGC GCGACCGCTG CATTCCAGGA TCTGCATTCG AGCTGGGCTG GATCAAACAG
ATCCGCCAAG ATTTCCCCAC CGCACCCGTT CTGGTGGTTG CCGGCGGCCT GTTCTACTAC
TTCGAGAAGG AAGCCGTGGT CACGCTACTG CGCCAGTTGA AGAATTTCGG ACCCATCGAA
ACCGTTTTCG ACACCGTCAA CAGCACTGGC ATGAAGTTTA TGGATGGCTA CATGAAACAG
CTTGGCCACG AGGATGCCAA GATGTTCTTC TATGTCGACA ATGCCGCTGA ACTCGGCAAT
GAATTGGACG GCGTCCTCTC GGCCGACGAG GAGCCGTATT ACCGGTCGAT TCCACGCAAG
GGTCTCGGGC TCGATACGAA GTTCAGGATG GTGTTCTCGG ACCGGTTCAA CATGGTGAAG
ATGGTGCACC TGAAGCTGGC ATGA
 
Protein sequence
MAELNTVSET LFVPLAGRIQ ISQQKPNILH DAKALELKSR VPAELLNKGK QSQYTLVASA 
SRAANLDRYI QTFRLRHPDG VIAQIGCGLE TAFYRNDDGY AVFYEIDLPE VIEFRREVLG
ETERDRCIPG SAFELGWIKQ IRQDFPTAPV LVVAGGLFYY FEKEAVVTLL RQLKNFGPIE
TVFDTVNSTG MKFMDGYMKQ LGHEDAKMFF YVDNAAELGN ELDGVLSADE EPYYRSIPRK
GLGLDTKFRM VFSDRFNMVK MVHLKLA