Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_23740 |
Symbol | |
ID | 8396263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2629501 |
End bp | 2630337 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644987121 |
Product | lysozyme M1 (1,4-beta-N-acetylmuramidase) |
Protein accession | YP_003144732 |
Protein GI | 257065060 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.162245 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCGCATTG CAGCAGTTGT CCTGCTGTTG GTCGTGTTCG CAGTGGGCGG CGGCATTGCC GGTTTTCTGG CCAGCGACCA GGGTGCGTCG GGCGAGCATC GGTTTACGGA AAGCCTGGGT GAAGGCGTCG ATGCGCAGAT CGAACCCATT TACGATTGGG GCAATCTGCG CATGACGGAA GACGGCCGTC GCGTCTACGA GATGAACGGC GAAGTGGTTT CCCGCCAGGG CATCGACGTT TCCGCACATC AGGAGCATAT CGACTGGAGC GCGGTGGTGG ACGACGGTAT CGATTTCGCC ATGATTCGCT TAGGCTACCG CTCGGTGGAC GAAGGCAACG TGGCTCTGGA CGACTACTAT GCGTACAACC TCGAACAGGC CCAGGCCAGC GGATTGGACG TAGGCGTGTA TTTCTTCTCG GCGGCCGTAA CGGTGGAAGA AGCCGTCGAA GAGGCCCAGT TCTGCATTGA GAACCTGCAG GCCCAGGACG CCCATCTGCA GTATCCCGTG GTTTTCGACC TGGAAATGAG CTACGGCGGA CGGGTTGAGG GCCTGACCCG CGACGAGCTG ACCGCCATCG CACAGGCTTT CTGCACGACG GTGGAGGAGG CCGGCTATCA GGCTATGGTG TACGGTAACG CATCCGACAT GCTCTGCTTC AATCTGGGCG ACTTGTCGGC CTACCCACGC TGGCATGCGG AATACACGCC ATCGCCGGCC TACGCCTACT ATGATTTCGT AATGTGGCAG TACACCGATT CGGGCCAGGT GGCAGGCATC GTCGGCAATG TCGATCTGGA CCTGGACCTG AGCGCGGCAC GACCGGAAGG GCGATAG
|
Protein sequence | MRIAAVVLLL VVFAVGGGIA GFLASDQGAS GEHRFTESLG EGVDAQIEPI YDWGNLRMTE DGRRVYEMNG EVVSRQGIDV SAHQEHIDWS AVVDDGIDFA MIRLGYRSVD EGNVALDDYY AYNLEQAQAS GLDVGVYFFS AAVTVEEAVE EAQFCIENLQ AQDAHLQYPV VFDLEMSYGG RVEGLTRDEL TAIAQAFCTT VEEAGYQAMV YGNASDMLCF NLGDLSAYPR WHAEYTPSPA YAYYDFVMWQ YTDSGQVAGI VGNVDLDLDL SAARPEGR
|
| |