Gene Shel_23740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_23740 
Symbol 
ID8396263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2629501 
End bp2630337 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content60% 
IMG OID644987121 
Productlysozyme M1 (1,4-beta-N-acetylmuramidase) 
Protein accessionYP_003144732 
Protein GI257065060 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.162245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCATTG CAGCAGTTGT CCTGCTGTTG GTCGTGTTCG CAGTGGGCGG CGGCATTGCC 
GGTTTTCTGG CCAGCGACCA GGGTGCGTCG GGCGAGCATC GGTTTACGGA AAGCCTGGGT
GAAGGCGTCG ATGCGCAGAT CGAACCCATT TACGATTGGG GCAATCTGCG CATGACGGAA
GACGGCCGTC GCGTCTACGA GATGAACGGC GAAGTGGTTT CCCGCCAGGG CATCGACGTT
TCCGCACATC AGGAGCATAT CGACTGGAGC GCGGTGGTGG ACGACGGTAT CGATTTCGCC
ATGATTCGCT TAGGCTACCG CTCGGTGGAC GAAGGCAACG TGGCTCTGGA CGACTACTAT
GCGTACAACC TCGAACAGGC CCAGGCCAGC GGATTGGACG TAGGCGTGTA TTTCTTCTCG
GCGGCCGTAA CGGTGGAAGA AGCCGTCGAA GAGGCCCAGT TCTGCATTGA GAACCTGCAG
GCCCAGGACG CCCATCTGCA GTATCCCGTG GTTTTCGACC TGGAAATGAG CTACGGCGGA
CGGGTTGAGG GCCTGACCCG CGACGAGCTG ACCGCCATCG CACAGGCTTT CTGCACGACG
GTGGAGGAGG CCGGCTATCA GGCTATGGTG TACGGTAACG CATCCGACAT GCTCTGCTTC
AATCTGGGCG ACTTGTCGGC CTACCCACGC TGGCATGCGG AATACACGCC ATCGCCGGCC
TACGCCTACT ATGATTTCGT AATGTGGCAG TACACCGATT CGGGCCAGGT GGCAGGCATC
GTCGGCAATG TCGATCTGGA CCTGGACCTG AGCGCGGCAC GACCGGAAGG GCGATAG
 
Protein sequence
MRIAAVVLLL VVFAVGGGIA GFLASDQGAS GEHRFTESLG EGVDAQIEPI YDWGNLRMTE 
DGRRVYEMNG EVVSRQGIDV SAHQEHIDWS AVVDDGIDFA MIRLGYRSVD EGNVALDDYY
AYNLEQAQAS GLDVGVYFFS AAVTVEEAVE EAQFCIENLQ AQDAHLQYPV VFDLEMSYGG
RVEGLTRDEL TAIAQAFCTT VEEAGYQAMV YGNASDMLCF NLGDLSAYPR WHAEYTPSPA
YAYYDFVMWQ YTDSGQVAGI VGNVDLDLDL SAARPEGR