| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_23670 |
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| Symbol | |
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| ID | 8396256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2621933 |
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| End bp | 2623990 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644987114 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_003144725 |
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| Protein GI | 257065053 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0108296 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.784338 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGACA ATCTGACACC GGAAGAGACT GCCCCCGAGG CCGTCGAGGC TCCTAAGAAG
CGCACTGCCC GCCGCACCGC CAAGAAAACT GCGGAAGCCG TTCCCGAGGC AACCACGCAG
GAGGTGTCTG CCGACGCCGA ACCTGTGAAA AAGCCTCGCC GCCGTACGGT GAAGAAGGCC
GACGAGGCCT CCGCGGCGGA AACGCCCGCA ACGGAAGCCC CTGCCGAAGA GGCGCCCAAG
CGTCGCGGAC GTCCCCGCAA AGCCGTCGCG GAGCCCGCAA CGGCACCTGC CGCCGAGGCT
CCTGCGACCG AAACCCCTGC CGAAGAGGCG CCCAAGCGTC GCGGACGTCC CCGCAAGACG
GCCGTCAAGG AGAACCCGAC AGCCGAGGCT GCGCCTGAAG CCGCGCCCGA GGTTGCTCCC
GAGGCTGCGC CTGCCATGGC CGAGCCTGCA GCCCAGCCCG AAACTGCAGC CGACTCCGCC
GACGTCGCCC CTGCTCCCAC CGCTGCCGAG GCCGAGGCCG AAGAGCGGCC GCTGCCCAAG
CGCCGCCCCC GTGCGCGCGC CCACACCGTC GAAACCAAGA GCTCCGAAGC CGCTGCAGAT
GCGCAGGCCC AGGGCGAATC GCAGCCCGCT GCGGATTCCT CCGACGGCAA GCGCCAGCAG
TTCCAGAAAC AAAACAAGCA GAACAAGCAG CAGGGCAAGC AGAACAACAA ACAGCAGCAA
AACGGCAAGC AGCAGCGCCG CCAGCGCCGC AACAACGCCC AGCCCACCGG CCCCTCCGTC
TCTCTGGAAG AGCTCAACGA GCTCAAGGTG GCCGAGCTGC GTGAGAAGGC CGAGCTGCTC
GGCGTCGATT TCGCTGGGTT GAAGAAGGCG TCTTTGGTGG AGGCCGTGTT CGAAGCCACG
AAGAAGGCTG AAGGCATCTT CGAGGTCGAG GGCATTCTGG ATATCCTCCA GGACGGGTAC
GGATTCCTGC GCACCGGCGG CTATCTGCCC GGTGAGAACG ACATCTACGT TGGCACGGCA
CTCATCCGCC GCAACGGCCT GCGCAAAGGC GACTACGTCA AGGGGCAGAC GCGTCCGGCG
CGCGACAACG ACAAGTATGC CGCGTTGCAG ACCATCCACT CCGTCAACGG CAAGTCCCTG
GACGACCTTG CGGGACGTCC GCGCTTCGGC GATCTGACCC CGGTGTTCCC GGACGAGATT
CTCAAGATGG AGCACGGCCG CAATACCACC ACGGCCCGCG TCATCGATTT GGTGTCGCCC
ATCGGCAAGG GCCAGCGCGG TCTGATCGTG TCGCCTCCGA AGGCCGGCAA GACCACCATC
CTGAAGGATA TCGCCGCTGC TATCAGCGTG AACAACCCCG AGGTGCACCT CATGTGCCTG
CTCGTCGACG AGCGTCCCGA GGAAGTCACC GACATGCAGC GCTCCATCAA GGGCGAGGTC
ATCGCATCCA CCTTCGACAT GCCCACCGAG AACCACATCG TGGTGTCCGA ACTGGTCATC
GAGCGTGCGA AACGCCTGGT GGAGGACGGG CAGGACGTTG TCATCCTTCT GGACAGCCTG
ACCCGTCTGG CCCGCGCCTA CAACCTGGCG CAGCCTGCGT CTGGGCGCAT TCTGTCCGGT
GGCGTCGACT CCGCAGCCCT GTATCCGCCC AAGAAGTTCT TGGGCGCCGC CCGCAACATC
GAAGGCGGCG GCAGCTTGAC CATCCTGGCA TCGGCCCTGA TCGAAACCGG CTCGAAGATG
GACGAGGTCA TCTTCGAGGA GTTCAAGGGC ACGGGCAACA TGGAGCTCAA GCTCGACCGC
AACCTGGCCG ACCGTCGCAT ATTCCCGGCC ATCGACCCGG TGCAGTCCGG CACCCGCAAG
GAGGACCTGC TGCTCAATCC GCAGGAGGCC CCGCTCATCT GGGCCGTTCG CCGCATTCTG
GCCAACATGA ACAACACCGA GCGTGCCACG GACATGCTCA TCAAGTCGCT GCGCCAGACC
AAGGACAACC AGGAGTTCCT CATCCGCACC GCCAAGAAAG CGCAGACCAC GCGCAACATG
GACAACATGG AGCTTTAG
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| Protein sequence | MSDNLTPEET APEAVEAPKK RTARRTAKKT AEAVPEATTQ EVSADAEPVK KPRRRTVKKA
DEASAAETPA TEAPAEEAPK RRGRPRKAVA EPATAPAAEA PATETPAEEA PKRRGRPRKT
AVKENPTAEA APEAAPEVAP EAAPAMAEPA AQPETAADSA DVAPAPTAAE AEAEERPLPK
RRPRARAHTV ETKSSEAAAD AQAQGESQPA ADSSDGKRQQ FQKQNKQNKQ QGKQNNKQQQ
NGKQQRRQRR NNAQPTGPSV SLEELNELKV AELREKAELL GVDFAGLKKA SLVEAVFEAT
KKAEGIFEVE GILDILQDGY GFLRTGGYLP GENDIYVGTA LIRRNGLRKG DYVKGQTRPA
RDNDKYAALQ TIHSVNGKSL DDLAGRPRFG DLTPVFPDEI LKMEHGRNTT TARVIDLVSP
IGKGQRGLIV SPPKAGKTTI LKDIAAAISV NNPEVHLMCL LVDERPEEVT DMQRSIKGEV
IASTFDMPTE NHIVVSELVI ERAKRLVEDG QDVVILLDSL TRLARAYNLA QPASGRILSG
GVDSAALYPP KKFLGAARNI EGGGSLTILA SALIETGSKM DEVIFEEFKG TGNMELKLDR
NLADRRIFPA IDPVQSGTRK EDLLLNPQEA PLIWAVRRIL ANMNNTERAT DMLIKSLRQT
KDNQEFLIRT AKKAQTTRNM DNMEL
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