Gene Shel_23610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_23610 
Symbol 
ID8396250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2615330 
End bp2615884 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content60% 
IMG OID644987108 
Productribosome recycling factor 
Protein accessionYP_003144719 
Protein GI257065047 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0233] Ribosome recycling factor 
TIGRFAM ID[TIGR00496] ribosome recycling factor 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.093506 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGAGA TCTTGGCAGA TGCCGAAATC GGCATGGATG AGGCAATCGA CAATTTGAAG 
ACCGCTTTCG CAAGCGTCCG CACCGGCCGT GCCAACGCTA TGGTGCTCGA CAAGATCAGG
GTGGATTACT ACGGTGTCCC CACGCCCATC AACCAGATGG CTGCTGTGAA GGTGCCTGAG
GCCCACATGC TGACCGTCGA GCCGTGGGAT AAATCCATGC TGCGTGCCGT CGAAGCCGCC
ATCATGGCTT CCGACCTGGG CATTACGCCG TCCAACGACG GTCACGTCAT CCGCTTGCCG
TTCCCCGTCC TGACCGAGGA GCGCCGTAAA GAACTGGCCA AGACGTGCCA TACCTATGCC
GAGGAGTGCC GCATCGCCAT CCGCAACGTC CGCCGCGAGG CCAACGCCAA GATTGACAAG
GGCAAAAAGG CATCTGAGAT TCCCGAGGAC GACGCTCGCC GCGGAGAGGA GCAGGTCCAG
AAGCTGACCG ACTCCTACGT GAAGAAGGTC GACGAGCTCC TGAAGGCCAA AGAGGCCGAG
GTCATGTCCA TCTAA
 
Protein sequence
MEEILADAEI GMDEAIDNLK TAFASVRTGR ANAMVLDKIR VDYYGVPTPI NQMAAVKVPE 
AHMLTVEPWD KSMLRAVEAA IMASDLGITP SNDGHVIRLP FPVLTEERRK ELAKTCHTYA
EECRIAIRNV RREANAKIDK GKKASEIPED DARRGEEQVQ KLTDSYVKKV DELLKAKEAE
VMSI