| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_23520 |
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| Symbol | |
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| ID | 8396241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2602450 |
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| End bp | 2603778 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644987099 |
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| Product | collagenase-like protease |
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| Protein accession | YP_003144710 |
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| Protein GI | 257065038 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000439045 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGAAGA TGGAGCTCCT GGCGCCCGCG GGCGGTTGGG AACAGTTGGA ATACGCGGTT
CATTTCGGGG CCGACGCCGT GTATCTGGCG TCGCAGCGCT ACGGCATGCG CCGTCGGGCG
GACAACTTTA AAGAAGAGGA CCTGCCTCGG GCCATCGCTT TCGCACACGA CCACGGCGTT
GCGGTCCATG TGACCGTGAA CACGCTCATG ACCGACGAGA ACATCGACGA TCTGCCTCGA
TACTTCAAGC TGCTGGGAGA CGCCGGCGCC GATGCGGCCA TCATCGCGGA TATGGGAGCT
TTGGCCATCT GCCGCGAGGT GGCGCCGCAT GTTGACATCC ATCTGTCCAC GCAGGCGTCC
TGCATGAACG CCGCCTCGGC CCAGGTGTAC CAGAGCTTGG GCGTCAAGCG CGTCGTGCTG
GCTCGCGAAA TGAACCTGGA CGAAATCGCA CGCATGAAGA GCCGTCTGCC CGAGGGGCTT
GAAATCGAGG CCTTCGCCCA CGGTGCCATG TGCATGGCCT ATTCGGGTCG CTGCCTGATC
AGCGATTACC TTACCGGCCG CGGCGCCAAC AAAGGCAGTT GCGCACAACC CTGCCGTTGG
GAATACGCCC TGACCGAGCC GACGCGCCCG GGCGAGTACT TCCCGGTGGA AGAGGATGCC
GAGCAGGGGA GCTTCATTAT GAGCTCCCGC GATATGAGCA TGCTGGGGCA TTTGGACGAC
CTGGCGGCGG CGGGCATCGA CAGCATCAAG ATCGAGGGCC GCGCGAAAGG CACCTACTAC
GTGGCTTCGG TGGTGAACGC CTACCGCAAT GTGCTGGACG GCGGCGACCC CGAGGTGTGG
CAGCGTGAGC TGGAAACCAC CAGCCATCGC CCCTATTCCA CGGGGTTCTA TTACGGATTC
CCAGGTCAGA ATCCGATTTC TGCACAATAC AGCCGCAAAT ACCAGATGGT TGCCACGGTT
AAGTCCTGCG TGCCGGCCGA CGGAGGGTTC CAAGTGCGCG TCGTGTGCCG CAACCGGTTC
GACGATGGCG ACACGGTGGA GGTCCTGAGT CCTCGGACGC CGGTTCGGGA ATGCACGGTG
CGCAACCTGA TATGGCATGC CGCGCCGGAA ACCGACCTGA CGGACATCCT GCGGGACAAC
CTGGGTACCG TCGTCGGCCC CGACCCGGAA GTGGTGCACG GGCGTCTGTT GCGCGTGGGT
ATAGCCAACC GGACCATGGA GGAATACTCT TTCGATGTAC CGTTTGGATT GCAAGAACGT
GACATTGTGC GCATCTCGCG TGATACGTCG GCGATTATTT GCGAAAATGG ACCATCTCCG
TTTGCGTAA
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| Protein sequence | MAKMELLAPA GGWEQLEYAV HFGADAVYLA SQRYGMRRRA DNFKEEDLPR AIAFAHDHGV
AVHVTVNTLM TDENIDDLPR YFKLLGDAGA DAAIIADMGA LAICREVAPH VDIHLSTQAS
CMNAASAQVY QSLGVKRVVL AREMNLDEIA RMKSRLPEGL EIEAFAHGAM CMAYSGRCLI
SDYLTGRGAN KGSCAQPCRW EYALTEPTRP GEYFPVEEDA EQGSFIMSSR DMSMLGHLDD
LAAAGIDSIK IEGRAKGTYY VASVVNAYRN VLDGGDPEVW QRELETTSHR PYSTGFYYGF
PGQNPISAQY SRKYQMVATV KSCVPADGGF QVRVVCRNRF DDGDTVEVLS PRTPVRECTV
RNLIWHAAPE TDLTDILRDN LGTVVGPDPE VVHGRLLRVG IANRTMEEYS FDVPFGLQER
DIVRISRDTS AIICENGPSP FA
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