Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_23350 |
Symbol | |
ID | 8396224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2587083 |
End bp | 2587628 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644987082 |
Product | LSU ribosomal protein L5P |
Protein accession | YP_003144693 |
Protein GI | 257065021 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000205512 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000148901 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTACTC CTCGTCTGAA AGAAAAGTAT CAAAACGAGA TCATTGCGAA GCTCGAAAAA GAGCTGAACA TCGATAACAT CAACAAGGTT CCGCGCCTGG AGAAGATCGT TGTCAACATG GGTGTCGGCG AGGCCGCTTC CGACTCGAAG CAGCTCGACG CCGCCATGAA CGACATGCGC ATCATCACCG GCCAGCAGCC TTGCGTGACC CGCGCTAAGA AGTCCATCGC TGCCTTCCAT ATCCGCCAGG GTATGGCCAT CGGCTGCAAG GTCACCCTGC GCGGCGACCG CATGTGGGAG TTCCTGGACC GCCTGCTGTC CATGGCTCTG CCCCGCGTCC GCGACTTCCG CGGCATTCCC ACCACGAGCT TCGACGGCCG TGGCAACTAC ACTCTCGGCG TCACCGAGCA GCTGATCTTC CCCGAGATCG AGTATGACAA GATCGACCGC ACCCGCGGTA TGGACATCAC GTTCGTGACC ACCGCCGAGA ACAATGAGGC TGCCAAGGCT CTCCTCGACG CTCTGGGATT CCCGTTCAAG AAGTAG
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Protein sequence | MATPRLKEKY QNEIIAKLEK ELNIDNINKV PRLEKIVVNM GVGEAASDSK QLDAAMNDMR IITGQQPCVT RAKKSIAAFH IRQGMAIGCK VTLRGDRMWE FLDRLLSMAL PRVRDFRGIP TTSFDGRGNY TLGVTEQLIF PEIEYDKIDR TRGMDITFVT TAENNEAAKA LLDALGFPFK K
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