Gene Shel_23280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_23280 
Symbol 
ID8396217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2583954 
End bp2584403 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content62% 
IMG OID644987075 
ProductLSU ribosomal protein L15P 
Protein accessionYP_003144686 
Protein GI257065014 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0200] Ribosomal protein L15 
TIGRFAM ID[TIGR01071] ribosomal protein L15, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.332048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000574627 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAACTTT CTGATCTCCG CCCGAATCCG GGTTCTACCC ACAAGCGCAA GCGCGTCGGC 
CGCGGCCCCG CATCCGGTCA TGGTAAAACC GCCGGCCGTG GTATGAACGG CCAGAAGTCC
CGCGCTGGCG GCGGCAAGGG CGCCGGCTTC GAGGGCGGCC AGACTCCTCT GGCTATGCGC
CTCCCCAAGT TGGGCGGCTT CCGCAACATC AACCGTGTTG AGTATGCTCC CGTCAACGTG
AGCCGCATCG ACGACAAGTT CGAGGCCGGC GAGGTTGTGG ATCACGACTC TCTGGTTGCC
AAGGGCATCA TCAAGAAGAC CACCCAGCTG GTCAAGGTTC TGGGCGATGG CGAAATCACC
AAGGCCGTCA CCGTCAAGGT TGACAAGGTT TCTGCTAGTG CCGCTGCCAA GATCGAAGCG
GCCGGAGGAA AGGTTGAGCC GCTGTGCTAG
 
Protein sequence
MELSDLRPNP GSTHKRKRVG RGPASGHGKT AGRGMNGQKS RAGGGKGAGF EGGQTPLAMR 
LPKLGGFRNI NRVEYAPVNV SRIDDKFEAG EVVDHDSLVA KGIIKKTTQL VKVLGDGEIT
KAVTVKVDKV SASAAAKIEA AGGKVEPLC