Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_23260 |
Symbol | |
ID | 8396215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2581247 |
End bp | 2582440 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644987073 |
Product | phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase |
Protein accession | YP_003144684 |
Protein GI | 257065012 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase |
TIGRFAM ID | [TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0000352241 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTCGCCA ACAAGACCGT CGTCGTTGCC GTGTGCGGCA GCATCTCGGC GTACAAGGCC TGCGACCTGG TGTCACAGCT CGGAAAGCTC AACTGCACGG TTCGGGTCGC CATGACCGAG GCCGCCTGCA AGATCATCCC CGAGCTGCCG CTTGAAGTCC TTTCGGGGGC GCATGTCGTT ACGGGCATCT CGCCCGAGGA TTGCGAAACC GTGGATGTCT GGCTGGCTGA AGCCGATGCC GTTGTGGTGG CCCCCGCCTC GGCGAACACC ATCGCGTACG TGGCCATGGG CGAAGCCCCC AGCGCCGCGG CGTATGCGGT ACTTAACGCC ACGTGTCCGG TGATGGTGGC CCCCGCCATG AACGTGAACA TGTACCGAAA CGTCGCCACC CAGGAGAACC TGGAGATGCT ACGCAGCCGC GGCTACATCG TCATTCCACC CGTCAGCGGG CACTTGGCCT GCGGCGATGA CGGAGAAGGG AAGCTTCCTT CCATTCCGGA GCTCATCGAT TGGATCTGCC GCGAAATAGC CTGCGAGAAG GACCTCGCCG GCAAGAGCAT CCTGGTTTCT GCGGGGCCTA CCCGCGAGGC CATCGACCCG GTGCGCTTCA TCACCAACCA TTCAACGGGC ACCATGGGCT ATGCCATCGC GCGGCGCGCC ATGCTGCGCG GCGCGGACGT CACGCTGGTG TCGGGTCCTG TCAGTCTGAC GCCGCCGCCT TTCGTGAACG TGGTCGACAT CACCAGCGCC CAGGACATGT TCGAAGCCGT CAGCTCCCGC GCCGATGACC AGGACGCCGT CATCATGGCG GCGGCAATCG CCGACTACCG CCCGGCGGAC GTCAAGGGCG ACAAGATCAA GAAGGCCGAC GGGGCATTCG ACATCGATTT CGAACGCACG CCGGATACGC TGGCATGGCT CGGAGCGCAC CGCAACGGGC GCACGCTGCT GTGCGGCTTC TCTATGGAGA CCCGGGACGT GATCGAGAAC TCCCGCGGCA AGCTTCAGCG CAAGAACGTG GACATGATTG CGGCCAACAG TCTGCGCGAG CCAGGCGCCG GCTTCGGAAC GCCCACCAAC CACCTCACGT TCATCACAGC CGAAGGCGAA ATCGACCTGC CGCTGCTCTC CAAGGGCGAA GCGGCCGACC GCCTGCTCGA TGAACTGTTC AAGCTCACTC CGAAAAACGC TTAA
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Protein sequence | MLANKTVVVA VCGSISAYKA CDLVSQLGKL NCTVRVAMTE AACKIIPELP LEVLSGAHVV TGISPEDCET VDVWLAEADA VVVAPASANT IAYVAMGEAP SAAAYAVLNA TCPVMVAPAM NVNMYRNVAT QENLEMLRSR GYIVIPPVSG HLACGDDGEG KLPSIPELID WICREIACEK DLAGKSILVS AGPTREAIDP VRFITNHSTG TMGYAIARRA MLRGADVTLV SGPVSLTPPP FVNVVDITSA QDMFEAVSSR ADDQDAVIMA AAIADYRPAD VKGDKIKKAD GAFDIDFERT PDTLAWLGAH RNGRTLLCGF SMETRDVIEN SRGKLQRKNV DMIAANSLRE PGAGFGTPTN HLTFITAEGE IDLPLLSKGE AADRLLDELF KLTPKNA
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