Gene Shel_23210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_23210 
Symbol 
ID8396210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2576296 
End bp2576865 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content60% 
IMG OID644987068 
Productfructose-2,6-bisphosphatase 
Protein accessionYP_003144679 
Protein GI257065007 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00235832 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTTACA TCATTCGGCA CGGGCAGACG GATCTGAACT CCAAACACGT GCTGCAAGGG 
CAGAGCGACC ATCCGCTGAA CGAGGTCGGC GAACGCCAGG CCCAGGAGGC CGCCTTGCTC
ATCGGGAACG TGTCTTTCGC GAAGGTGTAT TCAAGCCCGC TGACCAGGGC TTTGCAGACG
GCGAGGATCG CCGCTCCTGG AGTGCCGGTT GTCGTCGATA GGCGCCTGAT CGAAATGGAC
TACGGTCCGT ATGAAGGAAT GGACCTGAAG AATCCTTCGC CTGAAATGGC CGAGTTCTTC
AGCGATTTTG TGCATAATCC CGCTCCCGAC GGCATGGAGC AGTTGGCAAG CGTGGTTGAG
CGGTGCGGCG CGTTTCTGGA GGACGTGCTT GAGGAGGCGC GCGCGACAGA CGTCCTTGTC
TCCACGCACG CCATCGCCAT GAAAGGGCTG CTCGAGTACC TGAATCCGCA GTCGAAAGGC
GGCTATTGGT CGAAGTTCAT CGGCAACTGC GCCATCTATA CGGCCAAGGT GGTCGAAGGC
GGGTTCGCGC TCCCCGTCGA GTTGCGGTAG
 
Protein sequence
MIYIIRHGQT DLNSKHVLQG QSDHPLNEVG ERQAQEAALL IGNVSFAKVY SSPLTRALQT 
ARIAAPGVPV VVDRRLIEMD YGPYEGMDLK NPSPEMAEFF SDFVHNPAPD GMEQLASVVE
RCGAFLEDVL EEARATDVLV STHAIAMKGL LEYLNPQSKG GYWSKFIGNC AIYTAKVVEG
GFALPVELR