Gene Shel_23150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_23150 
Symbol 
ID8396204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2567510 
End bp2568232 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content60% 
IMG OID644987062 
ProductABC-type cobalt transport system, permease component CbiQ 
Protein accessionYP_003144673 
Protein GI257065001 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.560602 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCAT CAGGTGATAC CTATACGTTC AGCATGCGCC GAGCACTGCT GGACCCGCGC 
ACGAAGCTTG CGTTGCTCGT GCTAATGGCC CTGTTCTGCC TGGCAGGCGT AGGCGGCGCG
CGGCTTGCGG AGTTCCGGGC TGTGCTGTCG GCTTTGCCGT TCGTGCTGAT GCTCGTGGAC
AAGCGCACCG CCTACGGCTT CGTGATGCTG GGGCTTCTGG TACTGTCTAA CGCATACATC
CTGTTCGCGT TCACCGGTAC AGGCGGGGTT TTCGAGAGCG TCATGATCGT GTTCACGTTC
GTCCTCATCC GGCTGATTCC GTGTTTGATG ATGGGCTCGT ACACCATGTC CACCACGTCG
GTGAGCGAGT TTTCGGCAGC CATGAACCGC ATGCATGTGC CGCAGCAAAT CACCATCCCG
TTCTCGGTCA TGTTCCGCTT CTTCCCCACC ATTAAGGAAA ACGCCGCCGA TTTGGGAGAA
TCCATGCGCA TGCGGGGCAT CAAAGGGTCG AACATAAGCA AATTCATCGA GTACCGGCTG
GTGCCGCTGG TGGAGGTGAC GTCCCGCAGC GGGGACGAGC TTTCCGCATC GGCGCTGGTC
AGAGGGCTTG GTTCGCCAAT CGCCCGCACC GACATCGCAC GCATAGGCTT CGGTGCGGGC
GACGCGGCCG TAGCCGTTCT GCTGGTTGTC GCGTTCGCCG TGTCTTGGGG GTTTTCGCTA
TGA
 
Protein sequence
MASSGDTYTF SMRRALLDPR TKLALLVLMA LFCLAGVGGA RLAEFRAVLS ALPFVLMLVD 
KRTAYGFVML GLLVLSNAYI LFAFTGTGGV FESVMIVFTF VLIRLIPCLM MGSYTMSTTS
VSEFSAAMNR MHVPQQITIP FSVMFRFFPT IKENAADLGE SMRMRGIKGS NISKFIEYRL
VPLVEVTSRS GDELSASALV RGLGSPIART DIARIGFGAG DAAVAVLLVV AFAVSWGFSL