Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_23150 |
Symbol | |
ID | 8396204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 2567510 |
End bp | 2568232 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644987062 |
Product | ABC-type cobalt transport system, permease component CbiQ |
Protein accession | YP_003144673 |
Protein GI | 257065001 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.560602 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTCAT CAGGTGATAC CTATACGTTC AGCATGCGCC GAGCACTGCT GGACCCGCGC ACGAAGCTTG CGTTGCTCGT GCTAATGGCC CTGTTCTGCC TGGCAGGCGT AGGCGGCGCG CGGCTTGCGG AGTTCCGGGC TGTGCTGTCG GCTTTGCCGT TCGTGCTGAT GCTCGTGGAC AAGCGCACCG CCTACGGCTT CGTGATGCTG GGGCTTCTGG TACTGTCTAA CGCATACATC CTGTTCGCGT TCACCGGTAC AGGCGGGGTT TTCGAGAGCG TCATGATCGT GTTCACGTTC GTCCTCATCC GGCTGATTCC GTGTTTGATG ATGGGCTCGT ACACCATGTC CACCACGTCG GTGAGCGAGT TTTCGGCAGC CATGAACCGC ATGCATGTGC CGCAGCAAAT CACCATCCCG TTCTCGGTCA TGTTCCGCTT CTTCCCCACC ATTAAGGAAA ACGCCGCCGA TTTGGGAGAA TCCATGCGCA TGCGGGGCAT CAAAGGGTCG AACATAAGCA AATTCATCGA GTACCGGCTG GTGCCGCTGG TGGAGGTGAC GTCCCGCAGC GGGGACGAGC TTTCCGCATC GGCGCTGGTC AGAGGGCTTG GTTCGCCAAT CGCCCGCACC GACATCGCAC GCATAGGCTT CGGTGCGGGC GACGCGGCCG TAGCCGTTCT GCTGGTTGTC GCGTTCGCCG TGTCTTGGGG GTTTTCGCTA TGA
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Protein sequence | MASSGDTYTF SMRRALLDPR TKLALLVLMA LFCLAGVGGA RLAEFRAVLS ALPFVLMLVD KRTAYGFVML GLLVLSNAYI LFAFTGTGGV FESVMIVFTF VLIRLIPCLM MGSYTMSTTS VSEFSAAMNR MHVPQQITIP FSVMFRFFPT IKENAADLGE SMRMRGIKGS NISKFIEYRL VPLVEVTSRS GDELSASALV RGLGSPIART DIARIGFGAG DAAVAVLLVV AFAVSWGFSL
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