| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_23140 |
|---|
| Symbol | |
|---|
| ID | 8396203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 2566926 |
|---|
| End bp | 2567510 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644987061 |
|---|
| Product | conserved hypothetical integral membrane protein TIGR02185 |
|---|
| Protein accession | YP_003144672 |
|---|
| Protein GI | 257065000 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02185] conserved hypothetical integral membrane protein TIGR02185 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.541294 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACACAA CTCGGAAACT GAACGGAAAG GACCTCATCA ACGTAGGCAT CTACACGGCG
CTGTACTTCG TGTGCGTGTT CGTCGTGGCG ATGCTCGGAC TCATCCCCGT CGGGCTGCTG
CTGCTCGTGG TGCTGGTGCC GCTCATCGCG GCCATCCCCT TCGTCATGTA CCTGGCGAAG
GTGCGCAAAC CCGGCATGCT GCTCATCACG TCGGTCATCA TGGGCGTCCT TATGCTGCTG
ACGGGCATGG GCTACTACTC GCTTATCCTG TCGGTCATCA CCGGCCTTGC CGCCGAATTC
ATTTGGAAGA ACGGAGGATA CACCTCCATC GGCAAGATTG CGCCGACGTA TGCCGTGTTC
AACCTGTGGA TGTGGGGCAA CTACCTGCCG CTATTCCTGA ACTACGATTC CTATGTTGCC
GCACGCCCCG AATACGGCGA CACCTACTGG CAGACCCTCA ACACGCTGCT GCCGCCGTGG
ATGCTTATCG TGCTGGCCGC CTGCATCGTG GTGTTCTCGA TTCTGGGCGC GCTGTACGCC
AAGAAGGTTC TGGCGAAAAA GCTTGCCGCT GCAGGAATGG AATAA
|
|---|
| Protein sequence | MDTTRKLNGK DLINVGIYTA LYFVCVFVVA MLGLIPVGLL LLVVLVPLIA AIPFVMYLAK
VRKPGMLLIT SVIMGVLMLL TGMGYYSLIL SVITGLAAEF IWKNGGYTSI GKIAPTYAVF
NLWMWGNYLP LFLNYDSYVA ARPEYGDTYW QTLNTLLPPW MLIVLAACIV VFSILGALYA
KKVLAKKLAA AGME
|
|---|
| |