| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_23130 |
|---|
| Symbol | |
|---|
| ID | 8396202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 2565142 |
|---|
| End bp | 2566875 |
|---|
| Gene Length | 1734 bp |
|---|
| Protein Length | 577 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644987060 |
|---|
| Product | ABC-type multidrug transport system, ATPase and permease component |
|---|
| Protein accession | YP_003144671 |
|---|
| Protein GI | 257064999 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.880015 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGGCG TCATCCGGAA GTTCTTCGCG TTCTGCCCCC AACATTACCG CAGCAAATTC
TACAAGGCCC TGGTCATCGG CGTGCTCATG TCGTTCTGCC GCGCCATGTC CATTCCCGCC
ATCGCACTCG TGCTGTCGGG GATGCTTGAC GACGGGCTGA CCCGCGTCCA CATCCTGGGA
AGCTTCGCCA TCATGGTGTT CGGCGTCGCC GGCGAAGGAA TCCTGCGCGG CCTCGCCACG
AACCTGCAGG TGCAGGGCGG ATACGGCACC TCCACCGAAA AGCGCATCGA AATCGCCGAG
CACATGCGAT ACCTGCCCAT GGGTTACTTC AACTCCAGCA GCCTGGGCGC CATCGCATCG
GTCACCACCA ACACCATGGA GAACCTGCAG GGCGTGGCCA CCCGCGTGAT CATGCTGGTC
AGCGAAGGCA TCCTGACCAC AGCCATCATC GCTGTCATGC TGCTTGTCTT CGACTGGCGC
ATCGGTTTGG TGCTTGTGGC CGGCTGCATC GTGTTCTTCC TGGTCAACCA TGCGTTGCAG
AAGAGGTCCG AGCGTTTGAG CCCTATCAAG GTGGCAACCG ACACGGAGCT TGTGGACACG
GTGCTCGAAT ACGTGCAGGG CATGCAGGAG GTGAAGTCCT TCGGCTTCAC GAAGGACCGG
ACCGAGCGTC TGAACCAGGC CATCGAGAAG AACGCCGGCG CGAACACGCA GATGGAGCTT
GAGCTGGTGC CGCTCATGGC GGCCCAGAAC AGCATCACCA AGCTGACCGG CGTGGCCATG
AGCCTGCTTT CCGTCTGGTT CTACCTGAAC GGCAGCATGA GCCTGCTGGT GTGCATCCTC
ATGATCGTCT CGGCGTTCAT GGTGTACGGC AGCCTGGAAT CGGCCGGGCA GTACTCCGGC
CTGCTGCGCA TCGTGGACGT GAGTGTGGAC CGTGCCAACG AGGTGCTGGC CATCGAGCCC
ATGGACATCG ACGGCGAGGA CATCCATCCG CAAAGCCACG ACATCGAAGT GCGCGACGTC
AGCTTCTCCT ACGGGCAGCG CACCATCTTG GACCACGTCA GTGCCACGAT TCCCGAAGGC
ACCACCACGG CCTTCGTCGG GCCTTCGGGC GGCGGCAAGA CCACGCTGGC AAGCCTCATC
TCGCGCTTCT GGGACGTGGG AAGCGGACAG GTGATGCTGG GCGGCCGCGA TGTTCGGGAC
TACAGCATGG ATTCGCTCAT GCGCAACTTC AGCTTCGTGT TTCAGAACGT GTACCTGTTC
GAAGACACCG TGGCGAACAA CATCCGTTTC GGCCAGCCTG AAGCCCCGCT TGCAGAAGTG
GTTGAAGCCG CCAAAAAGGC CCGGTGCCAC GACTTCATCA TGGCGCTGCC CCAAGGCTAC
GACACCGTAA TCGGCGAAGG CGGCGCGTCG CTTTCGGGCG GCGAGCGCCA GCGCATCTCC
ATCGCGCGGG CCACCATGAA GGATTCCCCC ATCATCGTGC TGGATGAAGC CACGGCCAAC
GTGGACCCTG AAAACGAGCG CGACCTGATG GACGCAATCC AGGAGCTTAC CTGCAACAAG
ACCGTCATCA TGATCGCCCA TCGCCTGAAA ACCGTGCGGG ACGCCGACCA GATCCTGGTG
GTGGATCAGG GACGCATCGT GCAGCGCGGC ACCCACGACG AGCTCATGGC CGAAGACGGC
ATCTACCGCC GCTTTGTGGA GACCCGCACG CAGGTCTCCC AATGGCAGCT GTAA
|
|---|
| Protein sequence | MIGVIRKFFA FCPQHYRSKF YKALVIGVLM SFCRAMSIPA IALVLSGMLD DGLTRVHILG
SFAIMVFGVA GEGILRGLAT NLQVQGGYGT STEKRIEIAE HMRYLPMGYF NSSSLGAIAS
VTTNTMENLQ GVATRVIMLV SEGILTTAII AVMLLVFDWR IGLVLVAGCI VFFLVNHALQ
KRSERLSPIK VATDTELVDT VLEYVQGMQE VKSFGFTKDR TERLNQAIEK NAGANTQMEL
ELVPLMAAQN SITKLTGVAM SLLSVWFYLN GSMSLLVCIL MIVSAFMVYG SLESAGQYSG
LLRIVDVSVD RANEVLAIEP MDIDGEDIHP QSHDIEVRDV SFSYGQRTIL DHVSATIPEG
TTTAFVGPSG GGKTTLASLI SRFWDVGSGQ VMLGGRDVRD YSMDSLMRNF SFVFQNVYLF
EDTVANNIRF GQPEAPLAEV VEAAKKARCH DFIMALPQGY DTVIGEGGAS LSGGERQRIS
IARATMKDSP IIVLDEATAN VDPENERDLM DAIQELTCNK TVIMIAHRLK TVRDADQILV
VDQGRIVQRG THDELMAEDG IYRRFVETRT QVSQWQL
|
|---|
| |