Gene Shel_23020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_23020 
Symbol 
ID8396191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2552463 
End bp2553212 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content62% 
IMG OID644987050 
Productnitroreductase family protein 
Protein accessionYP_003144661 
Protein GI257064989 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.373892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCA TGGAGGCCAT CGAAGAACGC TTTTCCTGCC GTGCTTACTC CGACAAGTCC 
ATCCCGGATG CCGTCATACA AGCGTTGCAG AACGAAATCC AGGTCATCAA CGACGACAAC
GATCTGAACT TCCAGCTCTA CGGCGCGCTC GAAGACGGCT CGCCTGCATT CAGCCTGTCG
CAGCAGATGT TCGCGGGAAC GGCCCCATGG TTCGCAGCCC TCGTAGGCCC CGACACCGAC
CTGGGCAAAG AGCAGGTCGG ATACTTCGGC GAATGCCTGG TGCTCCTGGC CACGCAGCTG
GGGCTGGGAA CGTGCTGGGT GGCCGGCACC TTCGACCGCT CCGCTGCGAA ATTCGAAGCG
CGTGAAGGCG ATGTGCTGCA CGACATCATC CCCTTGGGAT ACGCCGCTGA GAAAACGCCT
CTGAAGCAAC GCACCGTCCG CGCCGCCCTG CGCAAGCGTG ATAAGAAGCC CGGGGCTATG
CTTAAGGGTG TGAACTGGGA CGATGCACCC GCCTGGATAA AAGACGCCAT CGAAAGCGTT
ATCCTGGGAC CTTCCGCCGT CAACGAGCAG CCCGTCGTGT TCGAGATCGA TGCAGACGGG
GTGGTGCGGG CCACTGTCCC CACCATCAAG TCCGGGTTGG AGCTGACGGA CCTGGGCATC
GCCAAGCTTC ATTTCCAGCT CGCCGCAGGA AACTCAGGCA TAGCCGGTGC CTGGGAATGG
GGCGACGGCG GCCGGTTCCT CCTGGCATAG
 
Protein sequence
MKTMEAIEER FSCRAYSDKS IPDAVIQALQ NEIQVINDDN DLNFQLYGAL EDGSPAFSLS 
QQMFAGTAPW FAALVGPDTD LGKEQVGYFG ECLVLLATQL GLGTCWVAGT FDRSAAKFEA
REGDVLHDII PLGYAAEKTP LKQRTVRAAL RKRDKKPGAM LKGVNWDDAP AWIKDAIESV
ILGPSAVNEQ PVVFEIDADG VVRATVPTIK SGLELTDLGI AKLHFQLAAG NSGIAGAWEW
GDGGRFLLA