Gene Shel_22940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_22940 
Symbol 
ID8396183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2542351 
End bp2543661 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content62% 
IMG OID644987042 
Producthypothetical protein 
Protein accessionYP_003144653 
Protein GI257064981 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0567594 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGCA AAAGCAGCGT GGCATACGGG CGCATCGCCC TGATTCTGGC CCTGATTTCG 
GCCGTGTTTG CGTTCGTTTC CTTCCCCCAA GTCGCGTTGG CCGACGAGGC CGACGACGAC
AAGGCGGGCA TCGACCTTAC GGTCACGAAG GAGTTCACGG GCACGGCGGC CGATCTGATA
ACCGATGACG AGCTGGCCAC CGTCACCTTC GAACTTCTCA AAAAGGACGA CGAGGGCGCC
TTCACCTCGG TGGAGAAGGT GCCGTACAGC GATTTCGAAG ACGGTTCCTA TACCTTTTCT
GATGTTGAGG CGGGCAGCTA CCGGCTGGCC GAAGGCGGTG CCGAGGGGCT CGCGAAGCTC
CACGGGTGGG AATTCGAACA GACTTGGACC TGGGACGACG GATCGTCGGC TGCCGATTTC
GATATCTCGG ATGCCGACGT TGAGGAAGGT GTGGCGCCCC GCGCGACCGT GGTGAACCGC
TACGACCGGC AGACAACGGA GGTGACGGCC ACGGTGCGCT GGCAAGATGC GGCAGGCGCA
GCGATGGTTT GGCCCGATGG GGAAGAGGTC ACCCTTGATC TGTATGTGTT GGAGCCCGTG
GGAAACGTGT ATGCGATAGC TGACGATGCC GAGCCGTTGG CCAGCGTGAC GCTGGACGGG
CAGACCGACG CGGCGGGCGA GGCGAGGTCG GGCGCAGCGG TTTTCAAGGG CGTCGACCGC
TACGATGCCA ACGGAACCGT TCGCTATGCA GTTGTGCAGC GGGATGCCGT CCATGGTTAC
GAGGTCCGCT ACGGCAACGA TGCTGCAGCG GAATTCGCAG CTGTTTCTGA AGGTTCCGCC
CTGGTGGTTG ACCGGGCTGA ATCCACGTCT TTCACCCTTG ATGTGACCTG GGACAACGCA
CCGCACGGCA CCACAGCGAC AGTGCACCTG TACGCGTACG CGGCAGGGCA GGGGCCCGCT
CAAGCGCAGC TTGTGGACGA AGCAGACGCC ATCGTGCTCG ACGGCGTGCC CGACGATGCA
GGCGAGTCGA AGTCGTGGCA AGCGGCCTGG GATTGCCTTC CGGCCTACGA TGCGGACGGC
ACCGGGCTTG TCTACATCGC TCGCGAAGTC ACCTGTACAT CGGGCTGGAT GCCCGTGTAC
GCAGAAAGTG TGGATTACGC CTCTGACCAG GGTGTTATCG ACCACGTGCG CGACCCGTAC
GCGCTCATGA GCGACAATCC CTGGATAGCC CTTCTTCTTG CAGCATCGGT TCCCGTGCTT
ACCTGGCTCA CCGTCCAGAT GCACCGCTTC CGCAAACGTG CCGCCAAATA G
 
Protein sequence
MERKSSVAYG RIALILALIS AVFAFVSFPQ VALADEADDD KAGIDLTVTK EFTGTAADLI 
TDDELATVTF ELLKKDDEGA FTSVEKVPYS DFEDGSYTFS DVEAGSYRLA EGGAEGLAKL
HGWEFEQTWT WDDGSSAADF DISDADVEEG VAPRATVVNR YDRQTTEVTA TVRWQDAAGA
AMVWPDGEEV TLDLYVLEPV GNVYAIADDA EPLASVTLDG QTDAAGEARS GAAVFKGVDR
YDANGTVRYA VVQRDAVHGY EVRYGNDAAA EFAAVSEGSA LVVDRAESTS FTLDVTWDNA
PHGTTATVHL YAYAAGQGPA QAQLVDEADA IVLDGVPDDA GESKSWQAAW DCLPAYDADG
TGLVYIAREV TCTSGWMPVY AESVDYASDQ GVIDHVRDPY ALMSDNPWIA LLLAASVPVL
TWLTVQMHRF RKRAAK