Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_22920 |
Symbol | |
ID | 8396181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2541324 |
End bp | 2541764 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644987040 |
Product | response regulator of the LytR/AlgR family |
Protein accession | YP_003144651 |
Protein GI | 257064979 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3279] Response regulator of the LytR/AlgR family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGATAA CGATTGACGA GCGGCCGGAA GCGAACGACA TCGAGGTCGC AATCGTCTGC AGAAGGACGG ACCGGCAGGT CCTCGACATC GTCGCCAGGC TGCGCATGTT CGACCGCAAG GTCACGGGGA GCGCGGACGG AAGCACCCAC GTGGTGAACG CCGAAGACAT CCTCTACGTG GAGTCGGTAG ACAAGCGCAC GTTCTTCTAC ACCGCCGAAG ATGTGTACGA GACTGCGCTG CGCCTCTATG AGATGGAGGA ACGCCTGGAG GGATGCGACT TCCTGCGGGT GGCCAAGGGC TGCGTGGTGA ATTTCCGCAG GATCGCCTCG CTGTGCCCGG AGATGAACGG GCGGCTCGTG GCGACCATGG ACAACGGCGA ACAGGTCGTC ATATCGCGGC AGTACGCGCC GGACGTGCGC CGTAAGCTCG GAATGCTGTA A
|
Protein sequence | MKITIDERPE ANDIEVAIVC RRTDRQVLDI VARLRMFDRK VTGSADGSTH VVNAEDILYV ESVDKRTFFY TAEDVYETAL RLYEMEERLE GCDFLRVAKG CVVNFRRIAS LCPEMNGRLV ATMDNGEQVV ISRQYAPDVR RKLGML
|
| |