Gene Shel_22920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_22920 
Symbol 
ID8396181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2541324 
End bp2541764 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content62% 
IMG OID644987040 
Productresponse regulator of the LytR/AlgR family 
Protein accessionYP_003144651 
Protein GI257064979 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3279] Response regulator of the LytR/AlgR family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATAA CGATTGACGA GCGGCCGGAA GCGAACGACA TCGAGGTCGC AATCGTCTGC 
AGAAGGACGG ACCGGCAGGT CCTCGACATC GTCGCCAGGC TGCGCATGTT CGACCGCAAG
GTCACGGGGA GCGCGGACGG AAGCACCCAC GTGGTGAACG CCGAAGACAT CCTCTACGTG
GAGTCGGTAG ACAAGCGCAC GTTCTTCTAC ACCGCCGAAG ATGTGTACGA GACTGCGCTG
CGCCTCTATG AGATGGAGGA ACGCCTGGAG GGATGCGACT TCCTGCGGGT GGCCAAGGGC
TGCGTGGTGA ATTTCCGCAG GATCGCCTCG CTGTGCCCGG AGATGAACGG GCGGCTCGTG
GCGACCATGG ACAACGGCGA ACAGGTCGTC ATATCGCGGC AGTACGCGCC GGACGTGCGC
CGTAAGCTCG GAATGCTGTA A
 
Protein sequence
MKITIDERPE ANDIEVAIVC RRTDRQVLDI VARLRMFDRK VTGSADGSTH VVNAEDILYV 
ESVDKRTFFY TAEDVYETAL RLYEMEERLE GCDFLRVAKG CVVNFRRIAS LCPEMNGRLV
ATMDNGEQVV ISRQYAPDVR RKLGML