Gene Shel_22840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_22840 
Symbol 
ID8396173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2532882 
End bp2533844 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content62% 
IMG OID644987032 
Productpredicted deacylase 
Protein accessionYP_003144643 
Protein GI257064971 
COG category[R] General function prediction only 
COG ID[COG3608] Predicted deacylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCATA TCGTTTCCAG CCGCCAGATG GCGGTTGGCG AAGACCTGCA GGTAATTAAG 
AACCGCTTGA TTCCCCAGGA CGTATCCGCT GATGACGTCT CGAATCTGCC GCGCATCGCG
GTGGTGACGG GCATTCACGG CGACGAGCTG GAAGGCCAGT TCACCTGCTT CGAGGTGGCC
CGCCGTGTGA ACGAGCATCC GGAGTTCCTG ACGGGGGTCG TGGACATCTA TCCTGCCCTG
AATCCGCTGG GGGTCGGGGC CATTTCCCGC GGCATCCCCC AGTTCGATCT GGACATGAAC
CGCGTGTTCC CGGGCAAGAA CAGCGCGTCA CCCTTCGAGT CGATGGCAGC CGACATCGTG
GCCGACATCG CCGGCGCTAC CATCAGCCTG GACATCCACG CCAGCAACAT ATACCTGCGG
GAGCTGCCGC AGATTCGCAT CAACGAGATC TCCGGCGACG ACCTCATGCC TTGGGCGTTG
GAAAGCAACG TGGACTACGT GTGGGTTCAC GGCAACGCAA CGGTGCTCAA GGGCACGCTG
GCCTACAGCC TGAACGCCAT CGGTACGCCG TGTCTCGTGG TTGAAATGGG CGTCGGCATG
CGTTTGACCA GGGAATACGG CGAACAGCTG GCCGACGGCA TCTTCAACCT GATGCGCAAG
GCCGGCATCT GGTCGGGCCC TGTAGAGCAG GTGCACCGGC CCATCGTGAG CACCGACGGC
GAGGTCGGGT TCGTCAACGC CGACGTTGCG GGCGTGTTCA TGCCCGCCGT GCAGCACAAC
TGGAACGTGA AACGCGGCCA GGTGGTCGGC CATATCCTGG ACGCGGCGCA AGGCACGATT
CTTCAAGAAC TGACCAGCCC CTCAGACGGC CTGCTCTTCA CGCTGCGGGA ATACCCCATC
GTCTATCCAG GATCGCTCAT CGCGCGCATC CTCGGCGGGG TCGCGGATGG GAAGGAAGCC
TAA
 
Protein sequence
MIHIVSSRQM AVGEDLQVIK NRLIPQDVSA DDVSNLPRIA VVTGIHGDEL EGQFTCFEVA 
RRVNEHPEFL TGVVDIYPAL NPLGVGAISR GIPQFDLDMN RVFPGKNSAS PFESMAADIV
ADIAGATISL DIHASNIYLR ELPQIRINEI SGDDLMPWAL ESNVDYVWVH GNATVLKGTL
AYSLNAIGTP CLVVEMGVGM RLTREYGEQL ADGIFNLMRK AGIWSGPVEQ VHRPIVSTDG
EVGFVNADVA GVFMPAVQHN WNVKRGQVVG HILDAAQGTI LQELTSPSDG LLFTLREYPI
VYPGSLIARI LGGVADGKEA