| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_22790 |
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| Symbol | |
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| ID | 8396168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2529333 |
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| End bp | 2529992 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644987027 |
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| Product | Fe-S-cluster-containing hydrogenase subunit |
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| Protein accession | YP_003144638 |
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| Protein GI | 257064966 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
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| TIGRFAM ID | [TIGR00402] ferredoxin-type protein NapF |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGACG AGCCCAACAA GAACACGCAG CAGGAAGAAA AGGAACGGAC TTATGCCGGC
ATGTCGAGGC GCACGCTGCT CATCGGCGCG GGCGGCGCGG CGGTGGCCTT GGGCTTGGGC
ACGTTGAAGC CCCTTGCTGC CAACGCCGTG GTGCGCCCTC CGGGAGGACA GGACGAAGAC
CTCATGCTGG GGGCGTGCAT CCGTTGCGAG AAGTGCATCG AAGCATGTCC GCGCCGCGTT
ATTGCGCCGA CCCACGTGGA GGACGGATTC ATCAATCTCC GCACGCCTAC AATGGATTAC
GCGCTCGACT ACTGCGACTG GTGCACCGAG GAAAACGACG GTGTGCCGCT GTGCGTGGCC
GCCTGTCCGA CCCAGGCGTT GAAACTGCCT GCGGACGCAA CCCCCGAAAA CACCATTCTA
GGCATCGCCG AAATCAACAA GGACTGGTGT TTGGCCTACC GCTTCAAGGG GTGCCGGTTC
TGCTACGACG CCTGCCCCTA CGAGGCGATG GAGATGGATG AGAACAACAT CCCGCATGTA
ATCGAAGACA AATGCAACGG CTGCGGCCTG TGCTACACGG TGTGCGTGTC CATGCAGGAC
GCTTCCGTGG TCGCAGGCAT GACCGACCGC GCCATCGTCG TCAAGCCGAT CGAACGGTAA
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| Protein sequence | MSDEPNKNTQ QEEKERTYAG MSRRTLLIGA GGAAVALGLG TLKPLAANAV VRPPGGQDED
LMLGACIRCE KCIEACPRRV IAPTHVEDGF INLRTPTMDY ALDYCDWCTE ENDGVPLCVA
ACPTQALKLP ADATPENTIL GIAEINKDWC LAYRFKGCRF CYDACPYEAM EMDENNIPHV
IEDKCNGCGL CYTVCVSMQD ASVVAGMTDR AIVVKPIER
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