Gene Shel_22780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_22780 
Symbol 
ID8396167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2528379 
End bp2529320 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content64% 
IMG OID644987026 
Productpolyferredoxin 
Protein accessionYP_003144637 
Protein GI257064965 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCCA ATAAGATCCG CATGGCTGCG CCCATCGTCA TCTTCGTCGT CATTGCCGTC 
GCCTACGCGG CGTACGCCCC GGTGGGCACG CTCTCCGCAT TCGGCTGGTC CGACATCGCG
CTGCTGTGCC CGCTCGGCTC GCTGGCGACG CTGCTCGCCA CCAAAACCCT GATTCCCCGT
GTGGTTATCG CGTTCGTCAT CGCCGTCGTG CTCATCGTCC TGCTCGGCCG TGCGTTCTGC
GGCTGGATCT GCCCGGTTCC TGTGGTGTCG GAGCTGCGCA ACGCGTTTTC GCGCAAGCAG
GACCTGGAAA GCGCCGAGCG CGCCGAGCGT TCCAAGCGAG AGCTTGACAG GGACGTGGCT
CCGCTGACCG ATGCGGAAAT CGCCGGCCTG AAGGCCTGCA GCCGCGGATG CGGTTCGCTG
GCCGGCAAAG GCCAGGTCGA TTCCCGGCAT CTGGTGCTGG GCGGTGCGCT GCTGTCCACG
GCCGTCTTCG GATTCCCGGT ATTCTGCCTG GTATGTCCCA TCGGCCTGAC CTTCGCCACG
GTGTTTCTGC TCATGGGCCT GTTCGGCCAT GGCGACGTCA CCTGGTCTGT GGTGCTGGTT
CCTGCATTGC TGCTGGTCGA AGTCGTGTTC TTCCGTAAGT GGTGCAGCCA TATCTGCCCC
GTGTCCGCCT TGATGAGCCT TATCGGCAAG GCGAACCGGA CTTTCGTTCC TACCGTCGAC
GCATCATCCT GCGTCGAAAA CGTCAAGGGA ACCTCTTGCG GAGTGTGCCG CAAGGTGTGC
GACCAGGGCA TCGACCCGCG GCACCCTGAG CGCGGCGCCA ACTTCAGCGA GTGCACCAAA
TGCCGCAAGT GCGTCGAGGC CTGCCCGGGC AGCGCCATCG CGATGCCGTT CCTGCCGAAG
TCCAGCAGCG AACCTGTCGT GGTCGCCAAG GCTGAAGAAT AA
 
Protein sequence
MKSNKIRMAA PIVIFVVIAV AYAAYAPVGT LSAFGWSDIA LLCPLGSLAT LLATKTLIPR 
VVIAFVIAVV LIVLLGRAFC GWICPVPVVS ELRNAFSRKQ DLESAERAER SKRELDRDVA
PLTDAEIAGL KACSRGCGSL AGKGQVDSRH LVLGGALLST AVFGFPVFCL VCPIGLTFAT
VFLLMGLFGH GDVTWSVVLV PALLLVEVVF FRKWCSHICP VSALMSLIGK ANRTFVPTVD
ASSCVENVKG TSCGVCRKVC DQGIDPRHPE RGANFSECTK CRKCVEACPG SAIAMPFLPK
SSSEPVVVAK AEE