Gene Shel_22760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_22760 
Symbol 
ID8396165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2525216 
End bp2526085 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content62% 
IMG OID644987024 
ProductDMSO reductase anchor subunit 
Protein accessionYP_003144635 
Protein GI257064963 
COG category[R] General function prediction only 
COG ID[COG3302] DMSO reductase anchor subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTTC AATGGCCTCT CATTCTCTTC ACCACGCTGT TAGCCTGGTG CGCCGGCACC 
TTCGCCACCC AGGCTTACCT GGCCCTCAAG GGCAAAGGTG AGAGCATCCA AATGCCCGCA
TGGATCGCTT CTGTGGTCCT GCTGGCGGTT GGCGGCATCG CCGTGTTCTT CCACCTGCAG
CATTGGGAGC GCATCTTCAA CGGCTTCGGA CACCTGTCCT CCGGCATTAC CCAAGAGCTC
ATCGCCATTG TGGTCCTGGC GGTCATCGCC GTCATCTACC TGGCTATGAT CAGGCGTAAC
GAGGGCAAGG TCCCGTCCTG GCTGGCCATC GCGTCCATCG TCGTGAGCGT CGTCTTGGTC
GTCGTGATGG GCCACTCCTA CATGATGGAA GCCCGTCCCG CATGGAACAA CATCCTGTGG
ATTGTCTCGC TGCTCGGCGC CTCCTGCGTG CTGGGTCCCG CGACCGTGGC AACCATCGCC
GCCATCAAGG GCGAAGATGC TTCCGACCTA GCGATGCCCG CGCTCATCGG CGCCGTCATC
AACGCCGTGG CGTCCGTCGC CGCCGGCCTG AGTGTCGGGG CTGCCAACAG CGCCCTGACC
GACGTGGGCT ACTACTTCGA CCTGACCCAT CCCACCATGG AGCTGCTGAG CCCCGAGCTC
AGCGCCTTCA GCGGGGCCAG TGCCCTGCCC ATGATTCTGG GCGTCATCAT CATCGGAGCC
ATCTGCCCGA TCGTCGCCGC CTTCATGGGT AAGAAGTCCG GCAATTGGAA GATGTGGGGA
CCCATCGCAG TGGTGTGCGC CGTGATCGGT GCTATCTGCC TGCGTGTGGT GTTCTACTAC
GCCGGCGTGT CCATGTTCAT GTTCTACTAA
 
Protein sequence
MELQWPLILF TTLLAWCAGT FATQAYLALK GKGESIQMPA WIASVVLLAV GGIAVFFHLQ 
HWERIFNGFG HLSSGITQEL IAIVVLAVIA VIYLAMIRRN EGKVPSWLAI ASIVVSVVLV
VVMGHSYMME ARPAWNNILW IVSLLGASCV LGPATVATIA AIKGEDASDL AMPALIGAVI
NAVASVAAGL SVGAANSALT DVGYYFDLTH PTMELLSPEL SAFSGASALP MILGVIIIGA
ICPIVAAFMG KKSGNWKMWG PIAVVCAVIG AICLRVVFYY AGVSMFMFY