Gene Shel_22750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_22750 
Symbol 
ID8396164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2524536 
End bp2525216 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content60% 
IMG OID644987023 
ProductFe-S-cluster-containing hydrogenase subunit 
Protein accessionYP_003144634 
Protein GI257064962 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCAAT ACTCCATCCT GACCGACCTC AACCGCTGCG TCGGCTGCAT GTCCTGCATG 
GTTGCTTGCA AGGCGATCAA CGACGTGCCC ATCGGAAACT ATTGGAACAA GATTCTGCGC
ATCGGCCCTT ACAAGCGTGA GGACTATCAG ACGCCGAACG ATGTCGACAT GTACTACCTG
TGCGTGCAGT GCCAGCATTG CGCCGACCCC AAGTGCGTCG CCGTCTGCCC CACCAAGGCT
TCCCAGAAGA TGGAAGACGG CACCGTCCAG ATCGACAAGT CGAAGTGCAT CGGCTGCCAG
TTCTGCGTTA TGGCCTGCCC CTACGGCGTC CGTTACCTCA ACGAGGAGGA GCGCGTCGTC
GAGAAGTGCA CGATGTGCGA GCAGCTCATC GCCCAGGGCG GTCTGCCCCA GTGCGTCGTG
CAGTGCGGCG GCCGTGCCCG CTTCTTCGGC GATCTGGACA ACGGCATCGA ATCCTTCGAG
GCCCCGGACA TCGCCTACAT CGCCGATCGC GACAATAACG ACTTCAGTTA TGACCAGCTG
TATACCGGCA ACCGCATCAC CTTCGGCGAG CTCGCCGAAG AATACAACCA GGACACGGAC
GTTCACCGTC TGCCCGATGC GGGCAACGAG CCGAGCTTCG TGTATGTGCT GCGCGGACGT
GAATGGAAGG GAGCTGAATA A
 
Protein sequence
MAQYSILTDL NRCVGCMSCM VACKAINDVP IGNYWNKILR IGPYKREDYQ TPNDVDMYYL 
CVQCQHCADP KCVAVCPTKA SQKMEDGTVQ IDKSKCIGCQ FCVMACPYGV RYLNEEERVV
EKCTMCEQLI AQGGLPQCVV QCGGRARFFG DLDNGIESFE APDIAYIADR DNNDFSYDQL
YTGNRITFGE LAEEYNQDTD VHRLPDAGNE PSFVYVLRGR EWKGAE