Gene Shel_22630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_22630 
Symbol 
ID8396152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2506571 
End bp2507179 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content60% 
IMG OID644987011 
Producttranscriptional regulator 
Protein accessionYP_003144622 
Protein GI257064950 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGC CCGGAAGACC TCGCAAAGAT GCGAACGCCG GCGACGCCCG CCAACGCATC 
ATAGACGCAA CTGTCGCAAT TATCTCCCAG AAGGGCGCGG ACGCCGTCAC GGTGCGCAGC
GTCTGCGAGA AATCAGGACT GTCGAACGGC ACCTTCTACC ACCACTTCGC CAACAAAGAC
GAGCTCATGA TGGAGTTCGT GCACGATTCG CTGTTCGGCG AAGCCCAGCT CAACCACCCC
TTGGACCAGA TTGCCGAGCG CATCTGCGAC CTGTACCTGC ACCTTCTGCA CGGCTACATG
GGCATGGGCA AGGACTTCAT GAAGAGCTTC TACTCCACGA ACAACACCGC CCTGTCGGCG
TATATGGGAA CCCATGACGG AGCCTTCGCG CCTGGAACCA TCATGGAGAA AAGCGAGGTG
GAAATGCGGG CCGCGCAGGA CGCGGGGCTG GTCGACCCCG CAGCGGACGC GCACACCATC
TGCTGCGACA TCTGCACCAT TGTCAAAGGC TGCGTGTTCG AATGGTGCCT GGAAGACGGT
CGGATGGATG TGGAAGCCGC CCTCCATCGT CTGGTCGGCA ATTACCTCAG ACCTTACCTG
CGCGGTTGA
 
Protein sequence
MAKPGRPRKD ANAGDARQRI IDATVAIISQ KGADAVTVRS VCEKSGLSNG TFYHHFANKD 
ELMMEFVHDS LFGEAQLNHP LDQIAERICD LYLHLLHGYM GMGKDFMKSF YSTNNTALSA
YMGTHDGAFA PGTIMEKSEV EMRAAQDAGL VDPAADAHTI CCDICTIVKG CVFEWCLEDG
RMDVEAALHR LVGNYLRPYL RG