Gene Shel_22500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_22500 
Symbol 
ID8396139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2492580 
End bp2493080 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content63% 
IMG OID644986998 
Producthypothetical protein 
Protein accessionYP_003144609 
Protein GI257064937 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.682327 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATTCT TGGATAACGT GACTGCAAGC GTCAACCGCG GCGTGGCATC TGCCGGGCGC 
ACTACCGAAA CGCTGAAGCT GAAGAACCAG CTGAACGACA TCAACAAGCA GCGCCAGGCC
CTAGCCGCCC AGCTGGGTGC GAGTCTGTAC GAAGCGACCA GGGAAAACGT CGATTTCCGC
AGCGGTCGCG AGGGGCTCTA TGAAGGCATC GCCTCGCTGG ATGCCCAGCG CGAAGCCGTG
AACGCGCAAA TCATGCAGCT TGAAGCTCAG GAGCGTCAGC AGCAGATCAA CGCGCGCGTG
TACACGTGCC CGGGATGCGG CGGCCGCGTG GCGGAAACCG ATATGTTCTG CGCGACCTGC
GGAACGCCCA TTGCCCAGGT GAGAGCCGCA AATGCGATGC CTTCTCCCAT GCCCGGCCAG
GTGCCGTGCC CGCATTGCGG CTCGCCGATG AACCAAGGGG ACGCGTTCTG CATGCATTGC
GGCACGGCTG TCTCCCACTG A
 
Protein sequence
MGFLDNVTAS VNRGVASAGR TTETLKLKNQ LNDINKQRQA LAAQLGASLY EATRENVDFR 
SGREGLYEGI ASLDAQREAV NAQIMQLEAQ ERQQQINARV YTCPGCGGRV AETDMFCATC
GTPIAQVRAA NAMPSPMPGQ VPCPHCGSPM NQGDAFCMHC GTAVSH