| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_22480 |
|---|
| Symbol | |
|---|
| ID | 8396137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 2490201 |
|---|
| End bp | 2491208 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644986996 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003144607 |
|---|
| Protein GI | 257064935 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2815] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.606654 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTGCA CGAAATGCGG TTCGCAGGTT CCGGAAGGAA TGGCCTTCTG CGTGCAGTGT
GGCGCGCCTG TCAAGGGCGC GTCTGCGGCG CAGTCGCCCG ACGTCACGCA GGTGATGACA
GCAGGGCAGC CCGTGGGAAC CGGATACGTG GAGCCCATCC AGGATCCGTC GACGGGCGGC
CACGGCAAGA CCATCGCCGT GGTTGCGGCC TGCGCCGTCG TGGTGCTGGC GGCGGCGTTG
ACTGCGGTCC TGTTCATCGG TGGCATCGGT CCCTTTGACG ATGGTTCTGG CGACGACACC
AAGACGTCCC AGAAGGCTGA CAAGGACGAT AAGGAGGCCG AGGGCAAGAC AGAGGAATCG
TCGGCCAAGA CCGAGAAGGA TGATTCCGAC GAGAAGGGTG CCGAAGACGA GGCCGATACG
TCGGTTGAGG TTCCCGACCT TGCGGGCATG TATCAGGAAG ACGCTGAGAA GGTCCTTGCC
GACAACGGTT TGGTGCTGGG CACAGTGACC GAGCAGCATG ACGAAGCGGT CGAGAAGGGC
GCGGTCGTTT CTCAGGGAAC GAGTCCTGGC GAGCGCGTGG ATGCGGGAGC GGCGGTGGAC
CTGGTGGTGT CCAGCGGGCC TGTCGTCCAT ACCTATGAGG TTATTAGCGA GGCTATGACC
TGGGAAGACG CCAAGGCGTA CTGCGAATCC CAGGGCGGCT ATCTTGCCAC CATCACGTCG
GCGGAAGAAA ACGACAAGGT CAAGGCCGCC GTTGCTGCCA CCGACCGCAA GGTCTTCTGG
ATCGGGGCGA AACGCGGCTC CGGCGATGCC TTCGAGTGGG TGAGCGGCGA AGCTTTCAGC
TACAACGACT GGGCGGCGGG CGAGCCCAAC GACGACCAGG GCATCGAGGA TTACAGCGCC
ATCCTGATCA CGCCCGAAGG TGCCATGGCC TGGTACGACG TTCCAAACGA CGTGAGCGAG
TTCTATAAGT CCGACAAGCT CGCATTCGTC ATGGAGAAAG AGGAGTAG
|
|---|
| Protein sequence | MFCTKCGSQV PEGMAFCVQC GAPVKGASAA QSPDVTQVMT AGQPVGTGYV EPIQDPSTGG
HGKTIAVVAA CAVVVLAAAL TAVLFIGGIG PFDDGSGDDT KTSQKADKDD KEAEGKTEES
SAKTEKDDSD EKGAEDEADT SVEVPDLAGM YQEDAEKVLA DNGLVLGTVT EQHDEAVEKG
AVVSQGTSPG ERVDAGAAVD LVVSSGPVVH TYEVISEAMT WEDAKAYCES QGGYLATITS
AEENDKVKAA VAATDRKVFW IGAKRGSGDA FEWVSGEAFS YNDWAAGEPN DDQGIEDYSA
ILITPEGAMA WYDVPNDVSE FYKSDKLAFV MEKEE
|
|---|
| |