Gene Shel_22450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_22450 
Symbol 
ID8396134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2487990 
End bp2488490 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content58% 
IMG OID644986993 
Product7-cyano-7-deazaguanine reductase 
Protein accessionYP_003144604 
Protein GI257064932 
COG category[R] General function prediction only 
COG ID[COG0780] Enzyme related to GTP cyclohydrolase I 
TIGRFAM ID[TIGR03139] 7-cyano-7-deazaguanine reductase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.914422 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAACA CCGACAACCG CACAAAGGAA GGCCTGACCC TGCTGGGCAA CCAGGGCACG 
CGTTACTCGC AGGACTACGA CCCCACGCTG TTGGAGACCT TCGAGAACAA GCATCAGGAC
CACGACTACA TGGTCACGTT CCGCTGCCCC GAGTTCACCA CACTGTGCCC CATCACAGGC
CAGCCCGACT TCGCCACGCT CTACATCAAT TACATACCCA ACGTGCGCAT GGTGGAGAGC
AAGTCCCTCA AACTGTACCT GTTCAGCTTC CGCAACCACG GCGACTTCCA CGAAGATGTG
TGCAATATCA TCATGAACGA CCTGGTCAAG CTCATGGAAC CGAAGTACAT CGAGGTGCGC
GGCATGTTCT ATCCCCGCGG CGGCATCTCC ATCTACCCCT TCGCCAATTG GGCCAATCCG
GACTTCGGAT ATGGAGACAT TGCGGCGAGC CGCATGTTCT CGCAGCTGTC CGACCTAGAC
AAAGGCGACG GGGCACGATA G
 
Protein sequence
MANTDNRTKE GLTLLGNQGT RYSQDYDPTL LETFENKHQD HDYMVTFRCP EFTTLCPITG 
QPDFATLYIN YIPNVRMVES KSLKLYLFSF RNHGDFHEDV CNIIMNDLVK LMEPKYIEVR
GMFYPRGGIS IYPFANWANP DFGYGDIAAS RMFSQLSDLD KGDGAR