| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_22430 |
|---|
| Symbol | |
|---|
| ID | 8396132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 2486062 |
|---|
| End bp | 2486955 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644986991 |
|---|
| Product | predicted membrane protein |
|---|
| Protein accession | YP_003144602 |
|---|
| Protein GI | 257064930 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4905] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGGTCA GCAACTACAT CATCTGGTTT TTTGTCTGCA GCATGTTCGG ATGGTTGTTC
GAAACCGTCT ACGGCACCAT CGTCGAGCGC CAATGGGAGA ATCGCGGCTT CCTCTACGGA
CCTGCGTGCC CCATCTACGG CGTGGGCGCG CTGGCGGTGG TGTTCACCTA CCAGGTAGCC
ATGCATTTCG GCATCAGTAT GACCTGGTGG CAGGTGTTTT TGGTTACGTT CTTCGGCAGT
GCCGTGCTGG AATACGGCAC GTCCTGGACG CTGGAGAAGC TGTTCCACGC CCTGTGGTGG
GATTACTCCA ACATGCCGCT GAATATCAAC GGCCGCATCT GCCTGCCGGC ATCCACGCTG
TTCGGCTTTG CCGGCGTTGC GGTGGTCTAC GGCGTGTACC CTGCCATGCT CGAGCTCATC
ATGGCCACGC CTTCAGAGGT GCTGCAGCTG CTGGCGTTCC TCGTGACGGT GGTCATGACG
GCGGACGCCA CGCTGACCGT ATCGGCCCTG ACACGGTTCG CCCAGGTCAC GGCTGCAACG
GAAGAGCGGA TCAACGAGCA CATGACGGGG TTCGTGCAAG ACATCCAGTT CAAAGCGATG
GAGCTGGGGG ATGCGGCGGC TGCCGAGCGT GAGCGTCTGA AGACCCTCGG TCCTGATCAG
CTGATCGAAT TCGTGCAGTC GAAAGGCGCC GAGTTTCTAG CCGCCTTCCA AGAGGAGCGC
AGGCTATACT CGATGCAGCT GCTCAGCGAA CGGTTCGCCG ACCTGCCTGC CTCTGCGCGT
TCGGCGCTGC GCCGAGTGCA GGGCATACGT CCGGCTGTGC CCGGCCTGAG CGCGCAACGG
GTCAACGAGC TGTGGGAGGC CGCCAAACAG CGCCTTCCCC AAAAGAGAAG GTAG
|
|---|
| Protein sequence | MWVSNYIIWF FVCSMFGWLF ETVYGTIVER QWENRGFLYG PACPIYGVGA LAVVFTYQVA
MHFGISMTWW QVFLVTFFGS AVLEYGTSWT LEKLFHALWW DYSNMPLNIN GRICLPASTL
FGFAGVAVVY GVYPAMLELI MATPSEVLQL LAFLVTVVMT ADATLTVSAL TRFAQVTAAT
EERINEHMTG FVQDIQFKAM ELGDAAAAER ERLKTLGPDQ LIEFVQSKGA EFLAAFQEER
RLYSMQLLSE RFADLPASAR SALRRVQGIR PAVPGLSAQR VNELWEAAKQ RLPQKRR
|
|---|
| |