Gene Shel_22390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_22390 
Symbol 
ID8396128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2482447 
End bp2483037 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content61% 
IMG OID644986987 
ProductADP-ribose pyrophosphatase 
Protein accessionYP_003144598 
Protein GI257064926 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTGG TTGACGACAT CATCGCGTTC GCTCCTGTTA ACGAACAGGA GGCCGCAGAC 
AAGAAAATCA TCCTTCGCCA GTTGCTCAAC GACCCTCGGG TTTTCGACCG CGCGGCCATG
GCCCATATGG CATGCTCCAT TTGGGTGGTG GACCCCGAGT TCAAGAAGAC CCTGATGGTG
TACCACAACA TATATGACTC CTGGTCGTGG ATCGGCGGGC ATGCCGACGG CGAACAGGAC
CTGCAGGCCG TGGCACTGCG CGAGTTGGAG GAAGAGACCG GGGTGAAGAA CGCGCAGCTG
CTGACGTTTC GGGACAGCCC CATCTTCTCG CTGGACGTGC TGACGGTGGA CGGGCATGAG
AAGCGGGGCG CCTACGTCAG CTCGCACCTG CACCTGAACG TGACGTATTT CGCCGTGGCG
TCGATGGACG AGGAGATTCG CCCGAAGCCC GACGAGAACA GCGGTGTGAC CTGGATGCCT
CTCAAGCGTG TGCTGGCTGC ATCCACCGAG CCGTGGATTC GCGAGCGCGT GTACCGCAAG
CTTATCGTGA AGACGTTTTT GGCCGCCCAC GAACGGGGCC TGCCCAGGTA A
 
Protein sequence
MALVDDIIAF APVNEQEAAD KKIILRQLLN DPRVFDRAAM AHMACSIWVV DPEFKKTLMV 
YHNIYDSWSW IGGHADGEQD LQAVALRELE EETGVKNAQL LTFRDSPIFS LDVLTVDGHE
KRGAYVSSHL HLNVTYFAVA SMDEEIRPKP DENSGVTWMP LKRVLAASTE PWIRERVYRK
LIVKTFLAAH ERGLPR