Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_22360 |
Symbol | |
ID | 8396125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2479060 |
End bp | 2480280 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644986984 |
Product | arginine deiminase |
Protein accession | YP_003144595 |
Protein GI | 257064923 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2235] Arginine deiminase |
TIGRFAM ID | [TIGR01078] arginine deiminase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGGTA TCAACGTCAA GAGCGAAATC GCACCGCTCA AGAAGGTTAT CCTGCATCGC CCGGGGCGTG AGCTTTTGAA CCTCACCCCC GCGAAGCTCG AAGAACTGCT GTTTGATGAC ATCCCGTTCC TGAAAGTCGC CCAGCAAGAG CATGATGCGT TTGCGGCTGC TCTGCGCGGC GAAGGGGTCG AGGTTGTCTA TCTCGAGGAT CTGATGGCTG ATGTCATCGG CGCCGACGAG GCCGTGCGCG ATCAGTTTAT CGCGCAGTGG ACCCGTGAGG CCAACATCCA CACCGAGATG TACACCAACA TTCTTCGTGA CTACCTGTTG GAGAACTACG CGGATCCCAA AGCCATGGTC GAGAAGACCA TGGAAGGCGT TACGCTCAAC GAGCTCAACG TCGATCGTTC CAATGCTTTG GTCGACTTGG TTTCTAGCGC CACCGAAATG GTCGTCAACC CCATGCCCAA CCTGTACTTC ACCCGTGACC CGTTCGCAAA CGTGGGCAAC GGCGTTATGA TCAACCGCAT GTACTCCGTC ACGCGCAACC GCGAGACCAT CTACGGTGAG TACATCTACA AGTATCATCC GGACTTCGTC GGCACGCCTC AGTACTACAG CCGCTACAAC GCCTTCCACA TCGAAGGCGG CGACGTTCTG AACATCAACG AGCACACCCT GGCTATCGGC ATCTCCCAGC GTACCGAGCC CGACGCCATC GACGAGCTCG CCAAGGTCAT CTTCTACGAC GAGACCTCCA GCATCGACAC CATCCTGGCG TTCGACATCC CGAACAGCCG TGCGTTCATG CATCTGGACA CCGTCTTCAC GCAGATCGAC TACGACAAGT TCACCATCCA TCCCGGCATC ATGGGCCCGC TGACCGTCTT CGAAATCACC CCGACGGGCA ACGGCAAGAT CCATGCCACC GAGATCCACG ACACGCTGGA GAACATCCTG ACCAAGTACG TCGGCCAGCC TGTCGAGCTC ATCCCCTGCG GCGGCGGCGA CCGCATCGCT GCCGAGCGTG AGCAGTGGAA CGACGGCTCC AACACGCTGT GCGTCCGTCC CGGCACCGTT GTCGTCTACG AGCGCAACGA CGTGACGAAC GCCGTCCTCA CGGACAAGGG CATCCGTATC ATCCAAATCC CGTCCGCCGA GCTGTCCCGT GGCCGTGGCG GCCCGCGCTG CATGAGCATG CCTGCATGGC GTGAGTTCTA G
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Protein sequence | MKGINVKSEI APLKKVILHR PGRELLNLTP AKLEELLFDD IPFLKVAQQE HDAFAAALRG EGVEVVYLED LMADVIGADE AVRDQFIAQW TREANIHTEM YTNILRDYLL ENYADPKAMV EKTMEGVTLN ELNVDRSNAL VDLVSSATEM VVNPMPNLYF TRDPFANVGN GVMINRMYSV TRNRETIYGE YIYKYHPDFV GTPQYYSRYN AFHIEGGDVL NINEHTLAIG ISQRTEPDAI DELAKVIFYD ETSSIDTILA FDIPNSRAFM HLDTVFTQID YDKFTIHPGI MGPLTVFEIT PTGNGKIHAT EIHDTLENIL TKYVGQPVEL IPCGGGDRIA AEREQWNDGS NTLCVRPGTV VVYERNDVTN AVLTDKGIRI IQIPSAELSR GRGGPRCMSM PAWREF
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