Gene Shel_22360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_22360 
Symbol 
ID8396125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2479060 
End bp2480280 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content59% 
IMG OID644986984 
Productarginine deiminase 
Protein accessionYP_003144595 
Protein GI257064923 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2235] Arginine deiminase 
TIGRFAM ID[TIGR01078] arginine deiminase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGTA TCAACGTCAA GAGCGAAATC GCACCGCTCA AGAAGGTTAT CCTGCATCGC 
CCGGGGCGTG AGCTTTTGAA CCTCACCCCC GCGAAGCTCG AAGAACTGCT GTTTGATGAC
ATCCCGTTCC TGAAAGTCGC CCAGCAAGAG CATGATGCGT TTGCGGCTGC TCTGCGCGGC
GAAGGGGTCG AGGTTGTCTA TCTCGAGGAT CTGATGGCTG ATGTCATCGG CGCCGACGAG
GCCGTGCGCG ATCAGTTTAT CGCGCAGTGG ACCCGTGAGG CCAACATCCA CACCGAGATG
TACACCAACA TTCTTCGTGA CTACCTGTTG GAGAACTACG CGGATCCCAA AGCCATGGTC
GAGAAGACCA TGGAAGGCGT TACGCTCAAC GAGCTCAACG TCGATCGTTC CAATGCTTTG
GTCGACTTGG TTTCTAGCGC CACCGAAATG GTCGTCAACC CCATGCCCAA CCTGTACTTC
ACCCGTGACC CGTTCGCAAA CGTGGGCAAC GGCGTTATGA TCAACCGCAT GTACTCCGTC
ACGCGCAACC GCGAGACCAT CTACGGTGAG TACATCTACA AGTATCATCC GGACTTCGTC
GGCACGCCTC AGTACTACAG CCGCTACAAC GCCTTCCACA TCGAAGGCGG CGACGTTCTG
AACATCAACG AGCACACCCT GGCTATCGGC ATCTCCCAGC GTACCGAGCC CGACGCCATC
GACGAGCTCG CCAAGGTCAT CTTCTACGAC GAGACCTCCA GCATCGACAC CATCCTGGCG
TTCGACATCC CGAACAGCCG TGCGTTCATG CATCTGGACA CCGTCTTCAC GCAGATCGAC
TACGACAAGT TCACCATCCA TCCCGGCATC ATGGGCCCGC TGACCGTCTT CGAAATCACC
CCGACGGGCA ACGGCAAGAT CCATGCCACC GAGATCCACG ACACGCTGGA GAACATCCTG
ACCAAGTACG TCGGCCAGCC TGTCGAGCTC ATCCCCTGCG GCGGCGGCGA CCGCATCGCT
GCCGAGCGTG AGCAGTGGAA CGACGGCTCC AACACGCTGT GCGTCCGTCC CGGCACCGTT
GTCGTCTACG AGCGCAACGA CGTGACGAAC GCCGTCCTCA CGGACAAGGG CATCCGTATC
ATCCAAATCC CGTCCGCCGA GCTGTCCCGT GGCCGTGGCG GCCCGCGCTG CATGAGCATG
CCTGCATGGC GTGAGTTCTA G
 
Protein sequence
MKGINVKSEI APLKKVILHR PGRELLNLTP AKLEELLFDD IPFLKVAQQE HDAFAAALRG 
EGVEVVYLED LMADVIGADE AVRDQFIAQW TREANIHTEM YTNILRDYLL ENYADPKAMV
EKTMEGVTLN ELNVDRSNAL VDLVSSATEM VVNPMPNLYF TRDPFANVGN GVMINRMYSV
TRNRETIYGE YIYKYHPDFV GTPQYYSRYN AFHIEGGDVL NINEHTLAIG ISQRTEPDAI
DELAKVIFYD ETSSIDTILA FDIPNSRAFM HLDTVFTQID YDKFTIHPGI MGPLTVFEIT
PTGNGKIHAT EIHDTLENIL TKYVGQPVEL IPCGGGDRIA AEREQWNDGS NTLCVRPGTV
VVYERNDVTN AVLTDKGIRI IQIPSAELSR GRGGPRCMSM PAWREF