| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_22350 |
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| Symbol | |
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| ID | 8396124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2477353 |
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| End bp | 2478804 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644986983 |
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| Product | amino acid transporter |
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| Protein accession | YP_003144594 |
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| Protein GI | 257064922 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.012307 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGAAA ACAAGAAAGG CCTCGGCCTT TTTGCTTTGA TCGGCTTCGT CGTCAGCTCC
TGCATCGGCT CTGGCGTGTA TGCCACCACC GGCCAGCTGG CTAACGTAGC AGCTCCTGGT
CCCGCGCTGA TCGCTTGGTG CATCGCCGGC GTCGGCTTTT TGTTCCTGGC ACTGTCCCTG
TCCAGCCTCG GCTCCCAGAA ACCCGAGATC GAAGGCATCT ACGGCTACGC CAAGGAAGGC
TTCGGTCCGT TCTGCGGCTT CATCAGCGGC TGGGGTTACT GGCTGAGCGC ATGGTTGGGC
AACGTCGGCT TCGGCACGAT GATCGCCAAC GTGCTTGCCG GTGCATTCCC CGCCATTTTC
AGCACGGGCA CCGCAGGTTC CCCCAACTTC ATCGCCATCG TGGGCGTGTC TGCGTTCCTG
TGGCTCATCA CCTTCCTGGT CATCAATGGC GTCGAGAGCG CCGCGTTCCT GAACGCCGTC
GTCATGGTCG TCAAGATCGC CTCCATCGCC GCGTTCATCA TCTTCTGCAT CATCTGCTTC
CAGGGCGGCG TCTTCACCGC CGACTTCTGG GGCCAGGCTT CCGCCAACGC CGCCATCATG
GCGCAAAACG ACGTTGAGCT CGGCAGCGTC ACCACCCAGG TCATCAACTG CATCCTGATC
ATGATGTGGA TGTTCATCGG CATCGAGGGC GCAACGGTCA TGAACGCCCG TGCCGAGCGC
AAGTCCGACG TGGGCAAGGC CACGGTCATC GGCTTGATCA CCCTGCTGGT CCTCTACATC
GGCGCAACCA TCCTTCCCTA CGGCGTCATG CCCTACGAAG AGCTCATCGC AGCTCCCAGC
CCGGCAACCG TCACCGTGTT CGACTACATG GCTCCCGGTT GGGGCGGAAC CTTCATGAAC
GCAGCCATCA TCATCAGCGT CCTTGGCTGC TGGCTGTCCT TCACCATGCT GCCCGCCGAG
ACCTCCAGCG GCATGAGCAA CGATCACCTG TTGCCCGCAA GCTGGAACAA GATGAACGCA
AAGAACGCTC CGCAGATGGC CCTCATCATC GTCGGCGCCT GCACCCAGGT CTTCCTCGTC
ATCGCCTACT TCGCCGCCGA CGCCTACACC TTCGCCATCA GCATGTGCAC CGTGACCATC
ATCATCAGCT GGTCCTTCGC CGCTGCCTAC CAGATCAGGC TCGGCATCGA GCAGAACGAC
GTCAAGAGCA TCGCGTTCGG CGGTATTGCC CTGCTGTTCC AGGTTGCCAG CGTCGTGCTC
TCCGGCTGGG TGTGGATGCT GCTGGCCTGC CTCGGCTACA TTCCCGGCTT CATCTTCTAC
GGCCAGGCCC GCAAGGAGGC CGGTGCCGAG AAGGCTCTGA CCCGCAACGA GATGATCGGT
GCCGCGGCCA TCGCCGTCCT GGGCATCATC TCCATCCCGC TCACGGTCAT CGGCGTTATC
CCGGTCTTCT AA
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| Protein sequence | MSENKKGLGL FALIGFVVSS CIGSGVYATT GQLANVAAPG PALIAWCIAG VGFLFLALSL
SSLGSQKPEI EGIYGYAKEG FGPFCGFISG WGYWLSAWLG NVGFGTMIAN VLAGAFPAIF
STGTAGSPNF IAIVGVSAFL WLITFLVING VESAAFLNAV VMVVKIASIA AFIIFCIICF
QGGVFTADFW GQASANAAIM AQNDVELGSV TTQVINCILI MMWMFIGIEG ATVMNARAER
KSDVGKATVI GLITLLVLYI GATILPYGVM PYEELIAAPS PATVTVFDYM APGWGGTFMN
AAIIISVLGC WLSFTMLPAE TSSGMSNDHL LPASWNKMNA KNAPQMALII VGACTQVFLV
IAYFAADAYT FAISMCTVTI IISWSFAAAY QIRLGIEQND VKSIAFGGIA LLFQVASVVL
SGWVWMLLAC LGYIPGFIFY GQARKEAGAE KALTRNEMIG AAAIAVLGII SIPLTVIGVI
PVF
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