Gene Shel_22250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_22250 
Symbol 
ID8396114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2464739 
End bp2465365 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content65% 
IMG OID644986973 
ProductFe-S-cluster-containing hydrogenase subunit 
Protein accessionYP_003144584 
Protein GI257064912 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.255886 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAT ACGGAATGCT TATCGACACC AAGCGCTGCG TTGCCTGCGG CACCTGCGTT 
GTGGGATGCA AGGTCGAGAA CAACCTGCCC AAGGACATGT GGTACAACCG CGTGGTGAAC
GTGGGCGGCG AGAACCCCGA TTCGCCCAGC GGCACCTACG CCGCACGCGA CCTGGCCATG
GGCGCCTACA CCATGGCCTG CCAGCACTGC TCCAACCCGG CATGCGTCGA GGTGTGCCCC
ACGGGCGCAT CCTGGAAGGA CACCGAGACC GGCCTGGTGC TCATCAACTC CGACGACTGC
ATCGGCTGCG GCGCATGCCT GAACGCATGC CCCTACGACG TGCGCCGTCT GCAGGAAGGC
GAACCGGTCA GCTACACCGG CTTCGACATG GGCGGCCAAG GCGCCCCCGT GCACAAGGCC
AACGTCATGG AGAAGTGCAC CTTCTGCGCG CATCGCGTGG TTGACGGCGA GCTGCCGTTC
TGCGTGACGG TGTGCCCCGC CCGCGCCCGC ATCTTCGGCG ACCTGGAGGA TCCCGAATCC
GAGATCTCCA AGAAGCTGGC CGAGCGCGAG TACGAGCAGC TGTTGACCGA GGCCGGCACC
GAGCCCAACG TCTATCTGCT GAAGTAA
 
Protein sequence
MTQYGMLIDT KRCVACGTCV VGCKVENNLP KDMWYNRVVN VGGENPDSPS GTYAARDLAM 
GAYTMACQHC SNPACVEVCP TGASWKDTET GLVLINSDDC IGCGACLNAC PYDVRRLQEG
EPVSYTGFDM GGQGAPVHKA NVMEKCTFCA HRVVDGELPF CVTVCPARAR IFGDLEDPES
EISKKLAERE YEQLLTEAGT EPNVYLLK