| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_22200 |
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| Symbol | |
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| ID | 8396109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2456535 |
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| End bp | 2457479 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644986968 |
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| Product | RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003144579 |
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| Protein GI | 257064907 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0226618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.104251 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGAA ACGAACATGC TCGCCAGGTC AATGTGGTGG GGGATTCCAT CCGCATGTAT
CTGCGCGACA TCGGCAAGGT CGACCTGCTC ACGCCGGCTG AAGAGGTCGA GCTGGCCAAA
AAGTACCAAA CAGGGCTTGC GGCTGAAGCG GCCCTTGCCC AGATGAACGA GGGGTCCGTC
GAAGTCGATC GACGCGAATG TCGGAAGCTC CTGCGCGTGC AACGTGCCGG CCAAGAGGCG
AAAGACAAGC TGGTGGCCGC AAACCTGCGT TTGGTGGTAT CGATCGCCAA AAAGTACAGG
GGACGCGGCC TGCCCCTGCT TGACCTGGTG CAAGAAGGCA ATCTCGGTCT GATTCGCGCA
GTGGAGAAGT TCGACTACAC GAAGGGCTTC AAGCTGTCCA CGTACGCAAC CTGGTGGATT
CGTCAGGCGG TAACGCGGGC AATTGCCGAT AAGGCCCGAA CCATCCGGCT GCCCGTGCAC
GTGGTTGGAC TTATGAACAA GGTGGTTCGT GTCCAACATG AGCTTGCAGA CGAACTCGAG
CGCGATCCCA GCCCTGCTGA AATTGCCGAC AGGCTAGGCA TAAGCGAGCA GTGCGTGGTC
GAGCTTTTAA AGCTGGGATC CGAGCCGCTG TCCCTCGAAA CGCCTGTGGG CGACGATAAG
ACGAGTGAAA TAGGCGACTT CATCGAGGAC CGAAACTCCG AGGATGCTTT CGATGCGGCG
GCCGAAGCCA TGCTGCGCGA CGATGTGGCG TCGGCGCTGA GCCGGCTTCC CGAACGGGAA
CGCAAGATCA TCGAGCTGCG CTTCGGTATC GTGGACGGCG AGCCCCGAAC CTTGGCTCAG
ATTGGCGATC AACTGGGCGT GACCCGGGAA CGCATCCGCC AGATCGAATC CAAAACCCTT
GGCGACCTGG CGCTTTGCGA AGAGCTGCGA GGACATGCCT CGTAA
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| Protein sequence | MARNEHARQV NVVGDSIRMY LRDIGKVDLL TPAEEVELAK KYQTGLAAEA ALAQMNEGSV
EVDRRECRKL LRVQRAGQEA KDKLVAANLR LVVSIAKKYR GRGLPLLDLV QEGNLGLIRA
VEKFDYTKGF KLSTYATWWI RQAVTRAIAD KARTIRLPVH VVGLMNKVVR VQHELADELE
RDPSPAEIAD RLGISEQCVV ELLKLGSEPL SLETPVGDDK TSEIGDFIED RNSEDAFDAA
AEAMLRDDVA SALSRLPERE RKIIELRFGI VDGEPRTLAQ IGDQLGVTRE RIRQIESKTL
GDLALCEELR GHAS
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