Gene Shel_22160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_22160 
Symbol 
ID8396105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2453629 
End bp2454024 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content58% 
IMG OID644986964 
Producthypothetical protein 
Protein accessionYP_003144575 
Protein GI257064903 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00657592 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0267718 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAC AAGAACCGTC CATCGATCAG TGGCTGAAAG AGGCCAAGCA GGATCCGAAA 
GCTGCACAGT GCGGCATGTA TCTCACGCAT AACGGCGTGG TGCGCGCCAC TCCGAAAAAA
CAGGTGCGCG AAGGCGTCGA GGGCTTGGGC GAAGTGGTCC AGGTGGATTT CTCGTATGAT
GAGGAAGGCC TGCAGAAGGC CATTGAAGAG GCTCTGACCT GGGACGGCGT GTATTACGTG
CGCGTGTGGC TGAACGAGGG CGTGTGCAAC GTAGGCGATT CGCTTATGTA TGTGCTCATC
GGTGCCGACA TCCGCCCACG CTGCATCGAC GCGCTGCAGA AGCTGGTGGG CCACATCAAG
AACAACCTGG TGGTGGAGCG CGAAATCTTC GCATAG
 
Protein sequence
MAKQEPSIDQ WLKEAKQDPK AAQCGMYLTH NGVVRATPKK QVREGVEGLG EVVQVDFSYD 
EEGLQKAIEE ALTWDGVYYV RVWLNEGVCN VGDSLMYVLI GADIRPRCID ALQKLVGHIK
NNLVVEREIF A