Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_22120 |
Symbol | |
ID | 8396101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2449525 |
End bp | 2450289 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644986960 |
Product | CAAX amino terminal protease family |
Protein accession | YP_003144571 |
Protein GI | 257064899 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00629763 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGGAAAA TGGATTACGA GCAGCAAAAA GGAGTACTTG CGGTTTTGCT CTGGCCTCTC CTGTATATTT CAGGGATGGG TTTGTCCAAC TACATCGTAT ATCACGGCTA TCATATAGAG TACGGTGGTG ACGGGTATGC AAATGCGATG CTTCCGTTCC TTGCGGTTCT GGCAGCCGGT GCTCTAATCT GCCTGTTTGC CCAAAGAGAA CGGCTTGCCC TTCCGTGGAA AGAACGCGGC AGGCTGTCGT TGTTCCTGAT TGTGTTCCTG CCTCTTGCGG CAATGGCGCT ATACTTCCTG CTGACAAACG GTAGCTTTAC TAATGCGTTC ATGGCTCCGC TCGCGGCAAT GCTGCTTGTT GGCGTGGCGG AAGAAACCAT GTTCCGCAGA ATTCTTTTCA TCCGACTGCT CGGGCTGTTC CAGGGCCAAA GCTTCACAAA ACCGCTTCTG ATTTCCGCTG CATGCTTCAG CCTCCTTCAC GCGGTGAATA TTTTTGGAGG TTTACCGGCG CCGCAGGTTC TTATGCAGAT TGCTGCAACC TTTGTAGCTG GGCTGTTCTA TGTGCTTATG TTCGACTACA CCAGGAACAT CCATCTCCTG ATCGTAATGC ACTTTTTATG GGACTACATC CTGTTCAGCG GAGCAACGCA GCAGATTCCC GTCTATGCGA TCCTGATGGG TCTTTTGCAG GTTGCGGAGG TCATCATCAT GTTGTTGCTG CTAGCCGGAA AATGGGGGCA AAACGTCGCA GCTGAACGTA CATAG
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Protein sequence | MRKMDYEQQK GVLAVLLWPL LYISGMGLSN YIVYHGYHIE YGGDGYANAM LPFLAVLAAG ALICLFAQRE RLALPWKERG RLSLFLIVFL PLAAMALYFL LTNGSFTNAF MAPLAAMLLV GVAEETMFRR ILFIRLLGLF QGQSFTKPLL ISAACFSLLH AVNIFGGLPA PQVLMQIAAT FVAGLFYVLM FDYTRNIHLL IVMHFLWDYI LFSGATQQIP VYAILMGLLQ VAEVIIMLLL LAGKWGQNVA AERT
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