Gene Shel_22110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_22110 
Symbol 
ID8396100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2448799 
End bp2449512 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content52% 
IMG OID644986959 
Producthypothetical protein 
Protein accessionYP_003144570 
Protein GI257064898 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0058757 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGCTTTCTC ATCGTCGGAA CAAAGAAAAA ATCAGCCATC TGAGATGGTT CGATATTCTC 
GTCATTACTT TGATTATGTG GGGCGAGGGC ATCTACACCT CAACCGTGTC GTATATCGCG
TTGATGCGGG GTGCGACGAC CGTTGGTGAC AACCTTTCAT TTTCCGCTGC GGACAATTAT
GGCGCACTGG CGCTGCAGGC GGGGCTTCTG CTCCTTGCCC TGCTGTATCT GTGGCTACGC
CGATTCGATT TCAAAGCATG GACGATACAT TTCGACTTGA AGGCTGCCGG TTGCGGTATT
CTGATCTTCC TAGCCGCAGC ACTTCTGCTT GACGTCTACT TCCTGCTGAC CGACCCACTG
GCAGGCGTCC TCCCGTTTCC AGGGCCGATC GGTGCTTTCT TCGGAGGCGA AACGGTGTCC
GGTGTCATAT ACGCTCTGCT CAACGGCGTA TATGAAGAAC TCTATTTCCT CGGCATCTGC
CTTGCGGTGA GGAAAGAACA CCTGAAGTGG GCCGTTCCGT TCTCTCTGCT GATCAGGGTT
AGTTTCCATA CCTATCAGGG GATGCTTTCG GCTCTTGGAA TCGGGCTGCT GTTCGGTGCG
TTTATGTACC TGCTGTACCG CCGGTCAAAG GACAAGAACC TACTGCCTTT CTTTATCGCC
CATGCGATAG GAGACATATT CGGCTTGGGG ATTCTTTCGT ACTTTTGGAT ATAA
 
Protein sequence
MLSHRRNKEK ISHLRWFDIL VITLIMWGEG IYTSTVSYIA LMRGATTVGD NLSFSAADNY 
GALALQAGLL LLALLYLWLR RFDFKAWTIH FDLKAAGCGI LIFLAAALLL DVYFLLTDPL
AGVLPFPGPI GAFFGGETVS GVIYALLNGV YEELYFLGIC LAVRKEHLKW AVPFSLLIRV
SFHTYQGMLS ALGIGLLFGA FMYLLYRRSK DKNLLPFFIA HAIGDIFGLG ILSYFWI