Gene Shel_22100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_22100 
Symbol 
ID8396099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2447989 
End bp2448765 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content47% 
IMG OID644986958 
Producthypothetical protein 
Protein accessionYP_003144569 
Protein GI257064897 
COG category[S] Function unknown 
COG ID[COG3868] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00255841 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTTCTGTC TGGCCATATT GCTTGTCGGA TGCAGTACAC AGCCTAAAGA ATACGGCGTC 
TTCCTTGGCA TCGACAGTGA AGAAATGCAT AGGTTGGACA AGTACGACAT TGTCGTCATT
GAGCCTTCCG CGTTTTCCGC CGAACAGATC GACAAGCTGC ATGCAGAAGG GAAGACGGTT
TACGGCTACA TCAACGTCGG AGCTATCGAG GAATTCCGCC CCTATTACGA TCGCTTTCAG
GATTTGTTTC TTGGCATCTA CGAAGACTGG CCGGATGAGC GATGGATTGA TGTATCGTCC
CCTCTATGGC AGAACTTTGT CATTGACGGG CTTGGAAAAG ACTATGCGGC CATGGGACTG
GACGGGTTCT TTCTTGACAA TACCGATGTC TATTATCATT TTCCAGAAGA TGATGTTTTT
CAAGGGCTTT GTACGATCAT GAAGGGTCTG AAGAGCTATG GGTTGCCGTT AATTATTAAT
GGGGGCGATC CTTTTGTCTC AAGATGTATG GAAGAAGACA CAGCCCTGTC GCTGTTCGAC
GGAATCAATC AGGAAACGGT ATTTACCAGT ATAGATTTCA CAAATCAAAC CTACGGTCAG
CAGTCGGAAG CGGACACGGA GTATTTTCAG GAGTATCTTT CTAAAGCGAA AGAATACGGT
CTGTCCGTTT ACTTGCTGGA ATACAGGGCA GACAGCACGC TGTCAAAACA GATCGACGCT
TACTGTGCGA AAAACGGCTT TATCTGGTAC AACGCGGATG GGGTAGAGCT GCGGTAG
 
Protein sequence
MFCLAILLVG CSTQPKEYGV FLGIDSEEMH RLDKYDIVVI EPSAFSAEQI DKLHAEGKTV 
YGYINVGAIE EFRPYYDRFQ DLFLGIYEDW PDERWIDVSS PLWQNFVIDG LGKDYAAMGL
DGFFLDNTDV YYHFPEDDVF QGLCTIMKGL KSYGLPLIIN GGDPFVSRCM EEDTALSLFD
GINQETVFTS IDFTNQTYGQ QSEADTEYFQ EYLSKAKEYG LSVYLLEYRA DSTLSKQIDA
YCAKNGFIWY NADGVELR