Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_22100 |
Symbol | |
ID | 8396099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2447989 |
End bp | 2448765 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644986958 |
Product | hypothetical protein |
Protein accession | YP_003144569 |
Protein GI | 257064897 |
COG category | [S] Function unknown |
COG ID | [COG3868] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00255841 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTTCTGTC TGGCCATATT GCTTGTCGGA TGCAGTACAC AGCCTAAAGA ATACGGCGTC TTCCTTGGCA TCGACAGTGA AGAAATGCAT AGGTTGGACA AGTACGACAT TGTCGTCATT GAGCCTTCCG CGTTTTCCGC CGAACAGATC GACAAGCTGC ATGCAGAAGG GAAGACGGTT TACGGCTACA TCAACGTCGG AGCTATCGAG GAATTCCGCC CCTATTACGA TCGCTTTCAG GATTTGTTTC TTGGCATCTA CGAAGACTGG CCGGATGAGC GATGGATTGA TGTATCGTCC CCTCTATGGC AGAACTTTGT CATTGACGGG CTTGGAAAAG ACTATGCGGC CATGGGACTG GACGGGTTCT TTCTTGACAA TACCGATGTC TATTATCATT TTCCAGAAGA TGATGTTTTT CAAGGGCTTT GTACGATCAT GAAGGGTCTG AAGAGCTATG GGTTGCCGTT AATTATTAAT GGGGGCGATC CTTTTGTCTC AAGATGTATG GAAGAAGACA CAGCCCTGTC GCTGTTCGAC GGAATCAATC AGGAAACGGT ATTTACCAGT ATAGATTTCA CAAATCAAAC CTACGGTCAG CAGTCGGAAG CGGACACGGA GTATTTTCAG GAGTATCTTT CTAAAGCGAA AGAATACGGT CTGTCCGTTT ACTTGCTGGA ATACAGGGCA GACAGCACGC TGTCAAAACA GATCGACGCT TACTGTGCGA AAAACGGCTT TATCTGGTAC AACGCGGATG GGGTAGAGCT GCGGTAG
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Protein sequence | MFCLAILLVG CSTQPKEYGV FLGIDSEEMH RLDKYDIVVI EPSAFSAEQI DKLHAEGKTV YGYINVGAIE EFRPYYDRFQ DLFLGIYEDW PDERWIDVSS PLWQNFVIDG LGKDYAAMGL DGFFLDNTDV YYHFPEDDVF QGLCTIMKGL KSYGLPLIIN GGDPFVSRCM EEDTALSLFD GINQETVFTS IDFTNQTYGQ QSEADTEYFQ EYLSKAKEYG LSVYLLEYRA DSTLSKQIDA YCAKNGFIWY NADGVELR
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