Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_22090 |
Symbol | |
ID | 8396098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2446710 |
End bp | 2447567 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644986957 |
Product | predicted hydrolase or acyltransferase of alpha/beta superfamily |
Protein accession | YP_003144568 |
Protein GI | 257064896 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00622193 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGGCGGCC GGATCGAGAA AATGCGCATC CGCGCGAACG GGGTGGGCGT GACGTGCCAC TGCGCCGGGG GCGGCGACGA CGCCATCGTG CTGCTGCACG GCGCCGGCGT GGACTCGGCG ATGCTCTCCT GGGGGGAGGT GATCCCGCTG CTGTCCGGGC GGTACCGGGT CATCGCGCCC GACCTGCCGG GATACGGGAC GAGCGACCGA ATAGACGGCG AGTATACGCT GGCGTTCTAC GCCGAGGCGG TGAAGGGCGT GGTCGAGGCG TTCGGCGGCG AGCCGGTCGT CCTGGTCGGG CTGTCCTTAG GCGGCGGCAT ATGCCTGAAC ATGGCGCTGG CCTACCCGGA GCTCGTCAGG GCCCTCGTGC CGGTCGACGC GTGGGGTCTG TTCGACAGGC TGCCCTGGCA CCGGCTGACC CATTGGTTCG TCCACTCCAG GATAAACGAC AACCTGTACG CATGGGCGGG CAAGCATCCG TCCGTCATCA GGTTCTCCCT GGAATACAGC CTGTTCGGCG ACAAGTCCAG GGTGGGCGAC GGCCTGGTCG ACGAGATACT GGAGGCAATC CGGGAGCCCG GCGCGGGCAG GCCTTTCGTG TCCTTCCAGC GAAGCGAGAT CACGCCCACG GGCCTCGCCA CCGACCTGTT CGGGAGGCTC CAGGAAATCG CTGTGCCCAC GCTCCTCGTG CACGGCGCGC TCGACCGGGC GGTTCCCGTG GAAGGCGCCA TCCTTGCCGG CGAGAAGATC CCAGACTGCG AAGTGTACCT GATGGAGGGA TGCAAGCACT GGCCCCAGAA GGAGCGCCCG CAAGAGTTCG CGCGCGTCCT GCAGGCGTAC CTTGGGAGGA GGCTCTGA
|
Protein sequence | MGGRIEKMRI RANGVGVTCH CAGGGDDAIV LLHGAGVDSA MLSWGEVIPL LSGRYRVIAP DLPGYGTSDR IDGEYTLAFY AEAVKGVVEA FGGEPVVLVG LSLGGGICLN MALAYPELVR ALVPVDAWGL FDRLPWHRLT HWFVHSRIND NLYAWAGKHP SVIRFSLEYS LFGDKSRVGD GLVDEILEAI REPGAGRPFV SFQRSEITPT GLATDLFGRL QEIAVPTLLV HGALDRAVPV EGAILAGEKI PDCEVYLMEG CKHWPQKERP QEFARVLQAY LGRRL
|
| |