Gene Shel_22090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_22090 
Symbol 
ID8396098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2446710 
End bp2447567 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content68% 
IMG OID644986957 
Productpredicted hydrolase or acyltransferase of alpha/beta superfamily 
Protein accessionYP_003144568 
Protein GI257064896 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00622193 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCGGCC GGATCGAGAA AATGCGCATC CGCGCGAACG GGGTGGGCGT GACGTGCCAC 
TGCGCCGGGG GCGGCGACGA CGCCATCGTG CTGCTGCACG GCGCCGGCGT GGACTCGGCG
ATGCTCTCCT GGGGGGAGGT GATCCCGCTG CTGTCCGGGC GGTACCGGGT CATCGCGCCC
GACCTGCCGG GATACGGGAC GAGCGACCGA ATAGACGGCG AGTATACGCT GGCGTTCTAC
GCCGAGGCGG TGAAGGGCGT GGTCGAGGCG TTCGGCGGCG AGCCGGTCGT CCTGGTCGGG
CTGTCCTTAG GCGGCGGCAT ATGCCTGAAC ATGGCGCTGG CCTACCCGGA GCTCGTCAGG
GCCCTCGTGC CGGTCGACGC GTGGGGTCTG TTCGACAGGC TGCCCTGGCA CCGGCTGACC
CATTGGTTCG TCCACTCCAG GATAAACGAC AACCTGTACG CATGGGCGGG CAAGCATCCG
TCCGTCATCA GGTTCTCCCT GGAATACAGC CTGTTCGGCG ACAAGTCCAG GGTGGGCGAC
GGCCTGGTCG ACGAGATACT GGAGGCAATC CGGGAGCCCG GCGCGGGCAG GCCTTTCGTG
TCCTTCCAGC GAAGCGAGAT CACGCCCACG GGCCTCGCCA CCGACCTGTT CGGGAGGCTC
CAGGAAATCG CTGTGCCCAC GCTCCTCGTG CACGGCGCGC TCGACCGGGC GGTTCCCGTG
GAAGGCGCCA TCCTTGCCGG CGAGAAGATC CCAGACTGCG AAGTGTACCT GATGGAGGGA
TGCAAGCACT GGCCCCAGAA GGAGCGCCCG CAAGAGTTCG CGCGCGTCCT GCAGGCGTAC
CTTGGGAGGA GGCTCTGA
 
Protein sequence
MGGRIEKMRI RANGVGVTCH CAGGGDDAIV LLHGAGVDSA MLSWGEVIPL LSGRYRVIAP 
DLPGYGTSDR IDGEYTLAFY AEAVKGVVEA FGGEPVVLVG LSLGGGICLN MALAYPELVR
ALVPVDAWGL FDRLPWHRLT HWFVHSRIND NLYAWAGKHP SVIRFSLEYS LFGDKSRVGD
GLVDEILEAI REPGAGRPFV SFQRSEITPT GLATDLFGRL QEIAVPTLLV HGALDRAVPV
EGAILAGEKI PDCEVYLMEG CKHWPQKERP QEFARVLQAY LGRRL