Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_22030 |
Symbol | |
ID | 8396092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 2443232 |
End bp | 2444440 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644986951 |
Product | ornithine/acetylornithine aminotransferase |
Protein accession | YP_003144562 |
Protein GI | 257064890 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00254086 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACTCTTG AACATGAGCA GCAGCTCGAA AACGAATACG TAATGCCCAC CTTCGTCCGC AAGCCCGTCG AGTTCGTCAG CGGCTCGGGC ATGGAGCTTG TAGACGACAA GGGCAAAACC TATCTGGACT TCATCGGCGG CATCGGCGTG ATCGCCATCG GGCACTGCAA CCCGGTGCTG GCGGATGCCC TCGCCGAGCA GGCCCACAAA CTCATGCACG TCAGCAACTA CTACTATGTC GAAGGCCGCG GCGACCTGTC GAAGAAGCTT TGCGACATGC TGAACCACGG CGCTGCCGAA CCCGAGGTTT GGAAGACGTT CTACACGAAC TCCGGCGCCG AATCCAACGA ATGCGCCGTG AAGATCGCAC GCCTGCACGC CAAGAAGAAC GGGCGCGGCG GCACCATCGT CACGCTGGAG GGCAGCTTCC ACGGACGCAC GCTGGCGACG TTGGCCGCCA CGGCCCAGCC TGCCAAGCAG GAGGCGTTCC AACCGCTGCC TGCGGGGTTC GTCGCCACGC CGCCTAACGA CGTCGCAGCG TTGGAAGCCC TGTTCGAGGC CCAAGGCACC GACATCGCGG CCGTTCTCGT GGAGCCCATC CAGGGCGAAG GCGGCGTCAA GCCCCTCACC CAGGAGTTCA TGCAGGCCGT GCGCGAACAG TGCACGAAGC ACGGCGCGCT CATGATGTGC GACGAGGTCC AGACGGGCAT CTACCGTTGC GGCACCCCCT ACGCGTTCCA GAAGTTCGGC GTTGTGCCCG ACGTGGTCAG CATGGCCAAG GGCATCGGCG GCGGCATGCC CATGGGAGCC TGCGCTGCCC GTGGCGAAAT CGCCGACACT TTCTCGCCCG GCGACCATGG CACCACGTTC GGCGGCAGCT GCCTGGCAAT CACGGCAGCA AACACGACGC TCGATTACAT CCAGGAGCAC GACATCGCCG CCAACATTGA GGAAACGGGT GCTTACCTGC GCGAACAGCT GGCAACCCTG CCCCATATGA AAGAAGTCCG CGGCATGGGC CTTATGGATG CCATCGAATT CGACGACACG GTGGATGCGC CGGCGTTGGT TCTGGCAGCC CTTGAAGCCG ACCAGGGCCT GGTGCTCAAT TACACCGGTC CCCACACCAT GCGCTTCCTG CCGCCGCTGG TCTGCACCAA GGCGGATGTG GACGTCATGA TCGCCCAGAT GAAGGAGCTG CTCGGCTAA
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Protein sequence | MTLEHEQQLE NEYVMPTFVR KPVEFVSGSG MELVDDKGKT YLDFIGGIGV IAIGHCNPVL ADALAEQAHK LMHVSNYYYV EGRGDLSKKL CDMLNHGAAE PEVWKTFYTN SGAESNECAV KIARLHAKKN GRGGTIVTLE GSFHGRTLAT LAATAQPAKQ EAFQPLPAGF VATPPNDVAA LEALFEAQGT DIAAVLVEPI QGEGGVKPLT QEFMQAVREQ CTKHGALMMC DEVQTGIYRC GTPYAFQKFG VVPDVVSMAK GIGGGMPMGA CAARGEIADT FSPGDHGTTF GGSCLAITAA NTTLDYIQEH DIAANIEETG AYLREQLATL PHMKEVRGMG LMDAIEFDDT VDAPALVLAA LEADQGLVLN YTGPHTMRFL PPLVCTKADV DVMIAQMKEL LG
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