Gene Shel_22020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_22020 
Symbol 
ID8396091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2442218 
End bp2443210 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content62% 
IMG OID644986950 
ProductN-acetylglutamate kinase 
Protein accessionYP_003144561 
Protein GI257064889 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0548] Acetylglutamate kinase 
TIGRFAM ID[TIGR00761] acetylglutamate kinase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.869961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00246187 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAATACA CTTCCGACTT CCGCCAGATC CTGGAAACCC AGGGCGCCGA AACGCTCATC 
GAGGCGCTGC CCTGGTTCAA GGACGTCACC GGCAAAACCG TCGTCATCAA ATACGGCGGC
GCGGCCATGG AGGACCCCGA GCTCATGGAT TCGGTCATGA CCGACATCCT GCTGCTGAAG
ATCATCGGCG TGCGCCCCGT CATCATTCAC GGCGGCGGCA AAGCCATCAA CCGCATGCTG
GACAAGCTCA ACGTCCCCGT GAAGTTCGAA AACGGCCTGC GCGTGACCGA CGACGCCACC
ATGGACGTGG TGAAGATGGT GCTCACCGGC GACGTGAACG ACCAGCTGGT ACGCGCCGTC
AACAAGCACG GCAACCTGGC CGTGGGCCTT TCGGGCTCCG ACGCCGGCAC GCTGAAGGCC
GTGCAGAAGG ATCCGGCTTT AGGCCGCGTG GGCAAGGTCT CCGAGATCGA CCCCAGCTAC
CTGAACGACC TCATCAACGC GGACTACATT CCGATCATCG CAAGCATCGC AGCCAGCGCC
GACGATGACG GCGTCTACAA CATCAACGCC GACGAGGCCG CGGGCGACAT CGCTTCCGCC
ATCGGCGCCC ACAAGATCAT GTTCCTGACG GACGTGAACG GCCTGTACGA GAACTACCCC
GACCCCGACA CGCTCATCGC GTGGATGACC CAAGAGGAAG CCGAAGAGCT CATCGCTTCC
GGCAAGATCG CCAGCGGCAT GATTCCCAAG ATCAACGCCG CGCTGCACGC CCTTAAAGGC
GGTGTGCCCC GCGCCCACAT CCTGAACGGC AAAATTCCCC ACGCTATCCT GCTCGAAATG
CTCACCGACT CGGGCATCGG CACCATGATC CGACGCGCAG ACAGCGCCGA TCAGCTGGAA
CGCCACCCGC TGGACCGCTT CACCAAGCGC CTGTCCGAAA ACCTGTCCAT CGACCCCGAG
GGCGACGAAT ACGAATTCGA AATCGTCCAC TAA
 
Protein sequence
MKYTSDFRQI LETQGAETLI EALPWFKDVT GKTVVIKYGG AAMEDPELMD SVMTDILLLK 
IIGVRPVIIH GGGKAINRML DKLNVPVKFE NGLRVTDDAT MDVVKMVLTG DVNDQLVRAV
NKHGNLAVGL SGSDAGTLKA VQKDPALGRV GKVSEIDPSY LNDLINADYI PIIASIAASA
DDDGVYNINA DEAAGDIASA IGAHKIMFLT DVNGLYENYP DPDTLIAWMT QEEAEELIAS
GKIASGMIPK INAALHALKG GVPRAHILNG KIPHAILLEM LTDSGIGTMI RRADSADQLE
RHPLDRFTKR LSENLSIDPE GDEYEFEIVH