Gene Shel_22010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_22010 
Symbol 
ID8396090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2440883 
End bp2442181 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content66% 
IMG OID644986949 
Productglutamate N-acetyltransferase/amino-acid acetyltransferase 
Protein accessionYP_003144560 
Protein GI257064888 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1364] N-acetylglutamate synthase (N-acetylornithine aminotransferase) 
TIGRFAM ID[TIGR00120] glutamate N-acetyltransferase/amino-acid acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.162548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00277357 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGAGTTACT CCACCGACTT TTTCGACATT TCCGGGCTGG CGCTGGAGCC GCCGGCCCTC 
GACGATTTCG CCGTCATCGA ACGCGGCGGC GTGACCAGTG CCCAGGGATT CAAGGCATGC
GGTGTGGCTG GATGCTTCCG CCCCGCCACG CCCGATCGCC TCGACCTGGC CATTGTGGCA
AGCGATGCGC CCGCCCGCTG CGCCGGAACC TTCACGAAGA ACGAGTTTTA CGCCGCACCC
GTAGCCGTAA GCCGCGAACA TTCCGCGCAG GGCTGCGCCA AAGGTGTGGT CATCAACTCC
GGCACCGCCA ACGCGGCCAC CGGCACCGTG GGTATGGACA ACGCACGGCG CATGGCCGCC
ATCGGAGCCG AGGCCCTGGG GTGCGCGACC GAGGAAGTGC TCATCGCGTC CACCGGCGTC
ATCGGCCGCC ACATGGACAT GGGCAAGCTC GAAGCCGCCA TCCGCGCGGC TGCGCCCAAG
CTTTCCGCAG ATGCCGGGCA CGATGCGGCC GTCGCTATCC TGACCACGGA CACCCATGCC
AAGGAATTTG CCGTCAGCTG GACCACCGCC GACCCTGCCT ATGACAAAGC CACGTTCACC
GTGGGCGGCA TGGCCAAAGG CGCCGGTATG ATCATGCCGA ACATGGCAAC CATGATCTCG
GTCATCACCA CCGATGCGCC GCTAGGCCAG ACCTGCTGCC AGCAGGCACT TTCCGCAGCA
GTCGACGGGA GCTTCAACAA GGTGACTGTG GACGGCGACA CGTCCACCAA CGACACCTGC
CTGTTGATGG CAAACGGAGC CGCCGCCGCA GGCGCGCCGT GGATCGAACC CGGCAGCATC
GCCGCCGACG AGTGCGCCGC AGCCGTCGCC TACGTCTGCA CTACCATCGC CCGCGCGATG
GCCGCCGACG GCGAGGGCGC CACGAAGCTT CTGACCGTGC ATATCGCGGG CGCCGCAAAC
GATGCCGAAG CCGAAACCGC CGCGCGCACC GTGGCGAACT CCATGCTGGT CAAGACCGCA
ATTTTCGGAC ACGACGCCAA CTGGGGACGC ATCGCCGCCG CCATCGGGCG CTCCGGCGTG
CGCATGCGAC AGGAAAACAT GGACATCGAC CTTATGGGTG TCAACGTCCT GAAGGCCGGT
CTGCCCGTTC CCTTCGACGA GGACGACATG CTGGTCCGCT TCGAAGCCCC GGAGATCGTC
ATCGACGCCG ATCTGGGAGA AGGCGAAGGC GAATCCACCA TCTGGTCGTG CGATTTGACC
TTCGATTACG TGCACATCAA CGGCGACTAC CGCAGCTAG
 
Protein sequence
MSYSTDFFDI SGLALEPPAL DDFAVIERGG VTSAQGFKAC GVAGCFRPAT PDRLDLAIVA 
SDAPARCAGT FTKNEFYAAP VAVSREHSAQ GCAKGVVINS GTANAATGTV GMDNARRMAA
IGAEALGCAT EEVLIASTGV IGRHMDMGKL EAAIRAAAPK LSADAGHDAA VAILTTDTHA
KEFAVSWTTA DPAYDKATFT VGGMAKGAGM IMPNMATMIS VITTDAPLGQ TCCQQALSAA
VDGSFNKVTV DGDTSTNDTC LLMANGAAAA GAPWIEPGSI AADECAAAVA YVCTTIARAM
AADGEGATKL LTVHIAGAAN DAEAETAART VANSMLVKTA IFGHDANWGR IAAAIGRSGV
RMRQENMDID LMGVNVLKAG LPVPFDEDDM LVRFEAPEIV IDADLGEGEG ESTIWSCDLT
FDYVHINGDY RS