Gene Shel_22000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_22000 
Symbol 
ID8396089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand+ 
Start bp2439816 
End bp2440886 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content66% 
IMG OID644986948 
ProductN-acetyl-gamma-glutamyl-phosphate reductase, common form 
Protein accessionYP_003144559 
Protein GI257064887 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0002] Acetylglutamate semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01850] N-acetyl-gamma-glutamyl-phosphate reductase, common form 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.00250125 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones9 
Fosmid unclonability p-value0.0027226 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGTAAAAG CAGCGGTCAT CGGTGGCGCA GGATACGCAG GCGCCGAACT GGTTAGGCTG 
ATTGCCCGAC ATCCCGAATT CGAACTGATC GCCGTCACGT CCGACGCCGA CGCAGGCAAC 
CCCATCGCCG ACACGTATCC GGCGCTTCTG GGCGTCGAGC CCGCCTGCTT CACGCCGCAC 
GACGACCCGG CCGTGCTTGA TTGCGACGTG GCGTTTCTGG CCGTGCCCCA TACCGCGGGC 
ATGCATCACG CGGCGCGCCT TGTTGCCGCA GGCGTCACGG TGGTCGACCT GTCGGCCGAC 
TTCCGTCTTC CCCAGGATGT GTACGAAGCG GCCTACAACG TGGAACATAC CGCCGCTGAC 
CTGCTTGAAG GCGCGGCGTA CGGACAGCCC GAACTTAACC ATGCGGCGCT GGACGCGCTG 
GCTGCCAAGC ATGCGGAAGG AGAGCCCGTG GTGGTAGGCT GCGCAGGCTG CTACCCCACC 
GCCGTCTCGC TGGCCGCGGT GCCTGCCGTT CGTGCGGGCC TGGTTTCCGG CACGGTGATC 
GCCGACTGCA TTTCCGGCAT CTCGGGCGCC GGCAAGAAGC CCACCTACAA GACGCACTAC 
TGTTCGGCCA ACGAGGACGC CCAGGCCTAC GGCCTGCCTC TGCACCGCCA CGCCCCCGAA 
ATGGACATGG AGCTTGAAAT GGCCTGGTCC CAGGGCGAAA ACGAAGGTGC TGCGCCGAAG 
ATCCTGTTCA CGCCCCATCT GGCGCCGCTG GCACGCGGCA TGGTGGCCAC GCTGCACCTG 
CCCGTCACCA CCGAGGATGT GGACTGGCAG AAACTCTATG AGGATGCCTA CGCGGGCAAC 
CCCTTCGTCC ACGTGCTGCC CGCAGGCAAA AGCCCGCGCA CCTCGAGCGT CGCAGGCACG 
AACAACGCGC ACATCGGCGT GTTCCCGAAC CGCGGCAACG GGTACGTCAC GGTAATAAGC 
ACCATCGACA ACCTGGGCAA AGGCGCTGCG GCGCAGGCCA TCCAGTGCGC CAACATCATC 
TTCGGCTTCG ACGAGACCGC CGGTCTGGAA GGCATGGCGA GGGCCCTGTG A
 
Protein sequence
MVKAAVIGGA GYAGAELVRL IARHPEFELI AVTSDADAGN PIADTYPALL GVEPACFTPH 
DDPAVLDCDV AFLAVPHTAG MHHAARLVAA GVTVVDLSAD FRLPQDVYEA AYNVEHTAAD 
LLEGAAYGQP ELNHAALDAL AAKHAEGEPV VVGCAGCYPT AVSLAAVPAV RAGLVSGTVI 
ADCISGISGA GKKPTYKTHY CSANEDAQAY GLPLHRHAPE MDMELEMAWS QGENEGAAPK 
ILFTPHLAPL ARGMVATLHL PVTTEDVDWQ KLYEDAYAGN PFVHVLPAGK SPRTSSVAGT 
NNAHIGVFPN RGNGYVTVIS TIDNLGKGAA AQAIQCANII FGFDETAGLE GMARAL