| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_21960 |
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| Symbol | |
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| ID | 8396085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 2436161 |
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| End bp | 2436964 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644986944 |
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| Product | uncharacterized membrane protein |
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| Protein accession | YP_003144555 |
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| Protein GI | 257064883 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00559972 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.002494 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGACTTCG ATTTTCGCAA CTACCCCCTC ACCTGCTCGT TGATCGTCAT CAACGTCGTG
GTTTTCGCCG TGCTCGAAGT GCTCGGCATG ACCCAGGGCT ACACGCTGTA CAACGCGGGC
GTGCTGACCA CGTCCAGCCT GTTGGACGGC CAGTACTACA CCCTCATCAC GTCGATGTTC
CTGCATGGCG GGCTGATGCA TCTGCTTTGC AACATGATCA CGATGTATTA CATCGGCACC
GTCATCGAGG ACGTGTTCGG GCCGGTGCGG TTCCTCATCA TCTACTTTTT GTCAGGCATC
GCCGGAGGCC TGACGTCCAT GGCGGTCATG ATAGCCGCCG GCGAGAACGG AGGCGTCGTG
GGCGCGTCCG GCGCCCTGTT CGGCCTGTTC GGAGCCTACG GCTACCTGCT CGTCCGCGAG
CATCGCAAGC CCGTGGTGTT CATGCGCCCG ACCTCGTCTT CGGACCTCAA GGGCTTCTTC
GGGTTCTTGG TGTTGAACAT CATCATCGGT CTGACGCCAG GCATCGCCAT GGAGGCGCAC
ATCGGCGGCA TGATTTGCGG CCTTTTGGCG TCCATCCCCA TGTACGAGCT GATGCGCGTC
GCCGTCCAGC GCGAAATCGA CGCGGGGCAC ATCCCGGCGC CCTACATCCC CAAGCCGAAT
CCCGGCTACG ACTACGACGC CGCCACGGCC GCCCACGATG CCGCCATGGC AGCCCAGAAC
GACTTCAACC GGCGCTACGA TTCCGCCCGC CCCCATCAGA AGGAAGAGAT GCGCGAAGAG
GCCCTCGACC TGGACAAACG ATAG
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| Protein sequence | MDFDFRNYPL TCSLIVINVV VFAVLEVLGM TQGYTLYNAG VLTTSSLLDG QYYTLITSMF
LHGGLMHLLC NMITMYYIGT VIEDVFGPVR FLIIYFLSGI AGGLTSMAVM IAAGENGGVV
GASGALFGLF GAYGYLLVRE HRKPVVFMRP TSSSDLKGFF GFLVLNIIIG LTPGIAMEAH
IGGMICGLLA SIPMYELMRV AVQREIDAGH IPAPYIPKPN PGYDYDAATA AHDAAMAAQN
DFNRRYDSAR PHQKEEMREE ALDLDKR
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