Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_21930 |
Symbol | |
ID | 8396082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2431940 |
End bp | 2432899 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644986941 |
Product | ribose-phosphate pyrophosphokinase |
Protein accession | YP_003144552 |
Protein GI | 257064880 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00246187 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCTGACCG AGATGACGAA GGAGATGGCA ATTTTCAGCG GTTCGGTGAA TCCGAAGCTT GCTGAGGAGA TCGCCGATCA GTTGGGCATG CCGTTGGGCA ACATCAAACA CGAGAAGTTC GCGAACGGCG AAATCTACTG CCGCTACCTC GAGAACATCC GCGGCGATGA CGTGTTCTTG ATCCAGTCCG TCGCCGGCGA GCACATCAAC GACGCGCTCA TGGAGCTGCT CATCATGATC GATGCTGCCA AGCGCGCATC CGCCCGCTCC ATTTCGGCCG TCATCACGCA TTACGGCTAC GCTCGTCAGG AGCGCAAGGC TTCTCCCCGC GAGCCCATTA CGGCGAAGCT TGTTGCCGAC ATGCTTCAGG TCGCCGGTAT TTCGAACATC ATCACCATCG ACCTGCATGC GGCTGCAACC CAGGGCTTCT TCAACGTCCC GGTGAACCAC ATGACTGCAC TGCCGATTTT TGTTGACTAC TTCAAGCAGA AGGGCTTCGA CCCCGCGAGC CTGTGCGTGG TGTCGCCTGA TGTGGGTCGC GCCAAGGAAG CCAAGAAGAT GCAGATGCGG CTCGATTCCG ACATCGCCAT CATGCATAAG GACCGCCCGC GCCACAACCA GGCCGAGATT ACCGCGCTCA TCGGCGACGT CGAGGGCAAG ATCTGCATCA TCAACGACGA CATGATCGAC ACGGCCGGAT CCCTGGTGGC CGCCGCCGCA ACGCTGAAGG CAAAGGGTGC CGAGCGCATC TTCGCTTGCG CGACGCACGG CATCTTCAGC GGTCCCGCTT ACGATCGTAT CGAGAACTCG ATCATCGAAG AGGTCGTCGT CTCCAACACG ATTCCTGTTC CGCTGGAGCG TCAGACTGGC AAGATAAAGG TGCTGTCCGT GGCGCCGCTG CTTGCCAAGA CCATGAAGGC CGCTTACGAG AACGGGTCGA TTTCCGCCCT GTTCAACTAG
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Protein sequence | MLTEMTKEMA IFSGSVNPKL AEEIADQLGM PLGNIKHEKF ANGEIYCRYL ENIRGDDVFL IQSVAGEHIN DALMELLIMI DAAKRASARS ISAVITHYGY ARQERKASPR EPITAKLVAD MLQVAGISNI ITIDLHAAAT QGFFNVPVNH MTALPIFVDY FKQKGFDPAS LCVVSPDVGR AKEAKKMQMR LDSDIAIMHK DRPRHNQAEI TALIGDVEGK ICIINDDMID TAGSLVAAAA TLKAKGAERI FACATHGIFS GPAYDRIENS IIEEVVVSNT IPVPLERQTG KIKVLSVAPL LAKTMKAAYE NGSISALFN
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