Gene Shel_21780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_21780 
Symbol 
ID8396067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2412673 
End bp2412984 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content60% 
IMG OID644986926 
Productglutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit 
Protein accessionYP_003144537 
Protein GI257064865 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0721] Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit 
TIGRFAM ID[TIGR00135] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0385413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.118645 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGA AGCTCACCGA AGACGACGTG CGCGGCATGG CCGCGTATGC GCGCATCGGC 
TTGGATGCAG ACGAGCTGGC CCAGATGACG GTCGACCTCA ACAACATCCT GGCCACGCTG
GACCGCATCA AGGAATACGA CCTGGATGCT GTGGAGCCGA CGTTTCATCC TATCGCGGGC
CTTTCGAACG TCATGCGCGA CGACGTCGAG ACCTCCTCCT TCACGCAGGA AGAATCCCTG
GTCAATGCTC CAAAACAGCA GGATGGCAGC TTTCTGGTCC CATCGATTCT GGGCGAGGGG
AGCGACCGCT GA
 
Protein sequence
MTQKLTEDDV RGMAAYARIG LDADELAQMT VDLNNILATL DRIKEYDLDA VEPTFHPIAG 
LSNVMRDDVE TSSFTQEESL VNAPKQQDGS FLVPSILGEG SDR