| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_21770 |
|---|
| Symbol | |
|---|
| ID | 8396066 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 2411186 |
|---|
| End bp | 2412673 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644986925 |
|---|
| Product | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A |
|---|
| Protein accession | YP_003144536 |
|---|
| Protein GI | 257064864 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0135715 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.161821 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTATG CGACCGACAT GGGCGTCTCG CGCATCCACG AGGGTTTGGC GGCGGGGGAG
TTCTCCGCCT GCGACGTGGT GGATGCCGCG CTCGCCCACA TCAAGCAGGC CGACCCGCAG
CTCCATGCGT TTCTGGAGCT GACCGAAGAC GCCGCCCGGG CAGCTGCCGT GCGGGTGGAC
GGAGCCATCG CAAACGGCAC CTTTGGCCGG CTGGGTCCGC TGGCAGGCGT GCCTATCGCC
TTTAAAGACA ACATGAACCT GAAAGGCACC CGCACCACAT GCGCCTCGCA CATGTTGGAA
ACCTATGTGT CGCCCTATAC AGCCACCTGC GTGCAGCGCA TGCTGGATGC AGGATGTTTG
CCTTTGGGTA AGCTCAACAT GGACGAATTC GCCTTCGGAT CCACCACCGA AAACTCCGCG
TTCGGGCCCA CCCGTAACCC GTGGGACCCG GACCGCGTGC CCGGCGGCTC GTCGGGCGGA
AGCGCCGCGG CGGTGGCTTC GGGCATGACC GCCCTGGCAT TGGGCTCCGA CACCGGCGGG
TCCATCCGCC AGCCCGCGGG ATTCTGCGGC GTGGTGGGCG TCAAGCCCAC ATACGGCATG
GTGTCGCGAT ACGGTGTCGT TGCCTTCGGA AGCTCCCTTG ACCAGGTGGG ACCCTTCGCC
CGTAGCGTGA AGGACGCGGC CTTTGCCTTG GATGCGCTGT GCGGACGCGA CCCCATGGAC
TGCACGTCGC AGGACGTAGA AATCGACTTC GTGGCGGCAA CCGAGCGGCC CGTCGAAGGC
GCGCGCGTCG GCATCGTGCC GTCGTTCATG GAGGCTGAAG GCCTATCGTC CGAGGTCAAA
GCCCGTGTGG CCGAGGCCGC GGCGAAACTC GAAGCGGCGG GCGCCACGCT GGTCGAGGTG
GATCTGCCCC ATGCGGATGC CGCCATCAGC GCCTATTACG TGCTCGCGCC CTGCGAGGCC
TTCTCCAACC TGGCCCGATT CGACTCGGTG CGCTACGGCT GCTGCGATGC GGGTCATACC
GATCTGGGCG GCCAATACGA GGCCAGCCGC GCGAAGGGGT TCGGCGCCGA GGCCAAGCGC
CGCATCCTGC TGGGAAGCTA CCTGCTGTCA AGCGGCGTCT ACGACGAATA CTACGTCCGT
GCGCAGAAGG TCCGCACGCT CATCACACAG GACTTCCGCC GCGCGTACAG GCAATGCGAC
GTCATCCTGT CGCCGGTGGC GCCTACCGTG GCGCCCAAGT TCGGCGAACT TGCCGAACCC
GCGCAGATGT ATTTGTCCGA CGTGTTCACC ATCGCGCTCA ACATCGCCGG CAACGGGGGC
ATGACCGTGC CTTGCGGCCT GGGGCGGGAC AGCGGTATGC CCGTGGGCGT GCAGCTCATG
GCTCCGCAGT TCCAGGACGG AAACATGTTT GCGGTGGCAT CCGAGCTGGA ACGCATCTAC
GGACAGGCCC AGGTGGCACC CGCATTCGCG CCGAAAGCGG GTGAGTAG
|
|---|
| Protein sequence | MAYATDMGVS RIHEGLAAGE FSACDVVDAA LAHIKQADPQ LHAFLELTED AARAAAVRVD
GAIANGTFGR LGPLAGVPIA FKDNMNLKGT RTTCASHMLE TYVSPYTATC VQRMLDAGCL
PLGKLNMDEF AFGSTTENSA FGPTRNPWDP DRVPGGSSGG SAAAVASGMT ALALGSDTGG
SIRQPAGFCG VVGVKPTYGM VSRYGVVAFG SSLDQVGPFA RSVKDAAFAL DALCGRDPMD
CTSQDVEIDF VAATERPVEG ARVGIVPSFM EAEGLSSEVK ARVAEAAAKL EAAGATLVEV
DLPHADAAIS AYYVLAPCEA FSNLARFDSV RYGCCDAGHT DLGGQYEASR AKGFGAEAKR
RILLGSYLLS SGVYDEYYVR AQKVRTLITQ DFRRAYRQCD VILSPVAPTV APKFGELAEP
AQMYLSDVFT IALNIAGNGG MTVPCGLGRD SGMPVGVQLM APQFQDGNMF AVASELERIY
GQAQVAPAFA PKAGE
|
|---|
| |