Gene Shel_21730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_21730 
Symbol 
ID8396062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2405790 
End bp2406329 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content58% 
IMG OID644986921 
Producttranscriptional regulator 
Protein accessionYP_003144532 
Protein GI257064860 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000276333 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.440212 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGAC GCCAGAGAAA GACGCAGCGC GCCATTTTCG ACGCATTCGA AGCGCTTATG 
GCCGAAGAGC ATTACAGCCA GGTGACGGTG GCGCAGATTA TTGAGCGCGC AGACATCGGC
CGGTCGACGT TTTACGCCCA CTTCGAGACG AAGGACGATT TGATCGACAC CATCTGCACC
GAGATGTTCA ACCATATCTT CGAAGGGGTC AACTCCGATT GCGTGACGCA TGCCACGCTC
GAAACTCCCG GTCTGGAAGG CCAGCTCGCG CACCTGCTCT ATCATTTGAG GGACACGCAT
GGGGGCGTGA GCGGCAAGCT TCTTATGGAA GGCGAGCCGC ACTTCACTTC GCACTTCCAA
GGACGTTTGA AAGGGTTGCT TTCGGACGGA GCCTCTGCTT TTCCCGAAGC GGACGGTGAC
TTTGCACAGC GTTTGCTCGT AAGCGCGTTC TGCGAAGCCG TGGCCTGGTG GTTTGAACGG
GGATGCAAGA CGAGGCCGGA GGATGTGGCC AGGTGGTTCA TGCTGCCCTT GGACCGATAG
 
Protein sequence
MDRRQRKTQR AIFDAFEALM AEEHYSQVTV AQIIERADIG RSTFYAHFET KDDLIDTICT 
EMFNHIFEGV NSDCVTHATL ETPGLEGQLA HLLYHLRDTH GGVSGKLLME GEPHFTSHFQ
GRLKGLLSDG ASAFPEADGD FAQRLLVSAF CEAVAWWFER GCKTRPEDVA RWFMLPLDR