Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_21730 |
Symbol | |
ID | 8396062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2405790 |
End bp | 2406329 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644986921 |
Product | transcriptional regulator |
Protein accession | YP_003144532 |
Protein GI | 257064860 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000276333 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.440212 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAGAC GCCAGAGAAA GACGCAGCGC GCCATTTTCG ACGCATTCGA AGCGCTTATG GCCGAAGAGC ATTACAGCCA GGTGACGGTG GCGCAGATTA TTGAGCGCGC AGACATCGGC CGGTCGACGT TTTACGCCCA CTTCGAGACG AAGGACGATT TGATCGACAC CATCTGCACC GAGATGTTCA ACCATATCTT CGAAGGGGTC AACTCCGATT GCGTGACGCA TGCCACGCTC GAAACTCCCG GTCTGGAAGG CCAGCTCGCG CACCTGCTCT ATCATTTGAG GGACACGCAT GGGGGCGTGA GCGGCAAGCT TCTTATGGAA GGCGAGCCGC ACTTCACTTC GCACTTCCAA GGACGTTTGA AAGGGTTGCT TTCGGACGGA GCCTCTGCTT TTCCCGAAGC GGACGGTGAC TTTGCACAGC GTTTGCTCGT AAGCGCGTTC TGCGAAGCCG TGGCCTGGTG GTTTGAACGG GGATGCAAGA CGAGGCCGGA GGATGTGGCC AGGTGGTTCA TGCTGCCCTT GGACCGATAG
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Protein sequence | MDRRQRKTQR AIFDAFEALM AEEHYSQVTV AQIIERADIG RSTFYAHFET KDDLIDTICT EMFNHIFEGV NSDCVTHATL ETPGLEGQLA HLLYHLRDTH GGVSGKLLME GEPHFTSHFQ GRLKGLLSDG ASAFPEADGD FAQRLLVSAF CEAVAWWFER GCKTRPEDVA RWFMLPLDR
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