Gene Shel_21680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_21680 
Symbol 
ID8396057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2402889 
End bp2403332 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content58% 
IMG OID644986916 
Producthypothetical protein 
Protein accessionYP_003144527 
Protein GI257064855 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00327454 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAAA CCCAGACAGA ACCGTTGACT GACGAGCTGC TCGACGAGCT GCTTGCGGCG 
CCGAACCTCG ATTCCTACTT GGGAGAACGC CAGCCTGGCC GGCGGACCCT GTCGGATTAC
CTACAGCACT TGCTGGACAA GAAGGGCTTG GTCCAGTCGA AGGTCCTGGC TGAAACGGAA
ATAGGGTATA CGTACGGATA CGAGATCATT TCCGGGCGCA AGGAGCACCC GGCCCGCGAC
AGGGTGCTGC AGCTTGTGTT CGCAATGCAA ATGGACCTGA AAGAATCCGC CCGTACGCTG
CAGGCGGCAG GGCTGAGCCC GTTGTCTCCC AAAAACGAAC GGGACGCCAT CATCATCTTC
TGCGTCAACA AGGGCATGAG CATGATGGAA TGCAACGACG AACTGGTCAA ACGAGGCCAT
AAGGCGCTTT ACGACCCCGA TTAG
 
Protein sequence
MDETQTEPLT DELLDELLAA PNLDSYLGER QPGRRTLSDY LQHLLDKKGL VQSKVLAETE 
IGYTYGYEII SGRKEHPARD RVLQLVFAMQ MDLKESARTL QAAGLSPLSP KNERDAIIIF
CVNKGMSMME CNDELVKRGH KALYDPD