| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_21610 |
|---|
| Symbol | |
|---|
| ID | 8396050 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 2396821 |
|---|
| End bp | 2397387 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644986909 |
|---|
| Product | predicted membrane protein |
|---|
| Protein accession | YP_003144520 |
|---|
| Protein GI | 257064848 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1971] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.890881 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAATCG TCGAGGTCGT ACTCATCGGC GTGGCGCTTT CGATGGATGC CTTCGCCGTC
ACCATTTCGG ACATGTTCGC GTATCCGGCA ATGACCCGCG CCCGCCAGCT TATGCTGCCT
GTGGCGTTCG GCCTGTTCCA GGGGCTCATG CCGGTGTTGG GCTACATACT CGGCAGCGCG
TTCGGAGCCG TCATCGAGCG CTATTCGGGC ATCGTCGCCC TCATCATTCT GGGCTTCATC
GGCGGCAACA TGATTAAAGA AGGCGTGCAG ACGCTGCGAG ACGGAGGCGA TGGTGGAATG
GGCGTCGAAA GCGGCGTCAT CACGCTGCCT GCCGTGGTCA TGCAGGCCAT AGCCACCAGC
ATCGATGCCT TCGCTGTCGG CGTCACCTTG CGTGCCGAGG CGGTGTCCAT CGTTTCGGCG
GCTTCAATCA TCGCCTTGAC CACGTTTGCG CTGTGCATCG TGGCCCTCGT CGTAGGGCGC
CGGTTCGGAA CGGTGCTGGG CGAACGTGCC GAGGTCGTCG GCGGCATCGT GTTGGTGATT
ATCGGCATCA AGGCCATGCT TCCCTAA
|
|---|
| Protein sequence | MGIVEVVLIG VALSMDAFAV TISDMFAYPA MTRARQLMLP VAFGLFQGLM PVLGYILGSA
FGAVIERYSG IVALIILGFI GGNMIKEGVQ TLRDGGDGGM GVESGVITLP AVVMQAIATS
IDAFAVGVTL RAEAVSIVSA ASIIALTTFA LCIVALVVGR RFGTVLGERA EVVGGIVLVI
IGIKAMLP
|
|---|
| |