Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_21540 |
Symbol | |
ID | 8396043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2390085 |
End bp | 2390648 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644986902 |
Product | transcriptional regulator |
Protein accession | YP_003144513 |
Protein GI | 257064841 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGACA GGAACGCCGG CGATTTACGC GTGCAGAAGA CGCTTGACAA TATCCACTCG ACGTTCGAAG AGCTGATGGT GGAAATGCCT TTCGAGTCGA TTACCGTCAC CGCGTTATGC GCAAGGGCCC GCATCAATAA AAAGACGTTC TACCGGTACT ATCCCACCCT GAACGATCTT CTCGACGAAT ACGAGGATCG CTACGCCCGG GAGTACATCG AGCTTACATC CGGCATGAGG TATCCCGAAG ACCTCGAGCA GGTGACCGGG GATTTCCTCA GGTTCTCCGC AGCGCAGGGC CCCATGTACG ACGCCATCCT CTGCAACGAG AAGCACGGGC GCATATTCGC GAAGATCGCA AAAGGCATGG AGTCGGAACG CTATGCGAAC TCCGTGCCGC CGGAGGGGTG GACTGCAGAA GAATGGCACC TGTACATGGT GGGCGTAACC GCAGTCCAAT GGCAGACATA CCGCAAATGG GTTAAGGACG GCAAAGTCGT TCCTCTTGAG CGGTTGGTGG AAATCGCCTG CACCATCCTG GTTAAAGGCG GCCTGCTCAA GTAG
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Protein sequence | MFDRNAGDLR VQKTLDNIHS TFEELMVEMP FESITVTALC ARARINKKTF YRYYPTLNDL LDEYEDRYAR EYIELTSGMR YPEDLEQVTG DFLRFSAAQG PMYDAILCNE KHGRIFAKIA KGMESERYAN SVPPEGWTAE EWHLYMVGVT AVQWQTYRKW VKDGKVVPLE RLVEIACTIL VKGGLLK
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