Gene Shel_21540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_21540 
Symbol 
ID8396043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2390085 
End bp2390648 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content56% 
IMG OID644986902 
Producttranscriptional regulator 
Protein accessionYP_003144513 
Protein GI257064841 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGACA GGAACGCCGG CGATTTACGC GTGCAGAAGA CGCTTGACAA TATCCACTCG 
ACGTTCGAAG AGCTGATGGT GGAAATGCCT TTCGAGTCGA TTACCGTCAC CGCGTTATGC
GCAAGGGCCC GCATCAATAA AAAGACGTTC TACCGGTACT ATCCCACCCT GAACGATCTT
CTCGACGAAT ACGAGGATCG CTACGCCCGG GAGTACATCG AGCTTACATC CGGCATGAGG
TATCCCGAAG ACCTCGAGCA GGTGACCGGG GATTTCCTCA GGTTCTCCGC AGCGCAGGGC
CCCATGTACG ACGCCATCCT CTGCAACGAG AAGCACGGGC GCATATTCGC GAAGATCGCA
AAAGGCATGG AGTCGGAACG CTATGCGAAC TCCGTGCCGC CGGAGGGGTG GACTGCAGAA
GAATGGCACC TGTACATGGT GGGCGTAACC GCAGTCCAAT GGCAGACATA CCGCAAATGG
GTTAAGGACG GCAAAGTCGT TCCTCTTGAG CGGTTGGTGG AAATCGCCTG CACCATCCTG
GTTAAAGGCG GCCTGCTCAA GTAG
 
Protein sequence
MFDRNAGDLR VQKTLDNIHS TFEELMVEMP FESITVTALC ARARINKKTF YRYYPTLNDL 
LDEYEDRYAR EYIELTSGMR YPEDLEQVTG DFLRFSAAQG PMYDAILCNE KHGRIFAKIA
KGMESERYAN SVPPEGWTAE EWHLYMVGVT AVQWQTYRKW VKDGKVVPLE RLVEIACTIL
VKGGLLK