Gene Shel_21480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_21480 
Symbol 
ID8396037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2384424 
End bp2384894 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content60% 
IMG OID644986896 
Productdeoxycytidylate deaminase 
Protein accessionYP_003144507 
Protein GI257064835 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2131] Deoxycytidylate deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAA CCAGGCATAT CGAACGGCCC AGCTGGGACG AGTACTTCAT GCATCTGGCA 
TTCGAGGTCT CCAAGCGGTC GACCTGCCTG CGCCGCGCCG TTGGCGCCGT CATCGTCAAG
GACCGCCGCA TCTTGGCCAC GGGCTACAAC GGTGTTCCGT CCGGGCTGCG CCATTGCGAC
GAGACCGGGT GCCTTCGCCA GCAGCTCAAC GTACCGTCGG GCCAGCGCCA TGAAATCTGC
CGCGGTTTGC ACGCCGAGCA AAACGCCATC ATCCAGGCGG CCAGGTACGG CATCGACATC
GCAGGTTCAT CTATATATAT AACGACTCAG CCGTGCGTGG TATGCACCAA GATGCTCATC
AATGCGGGCA TCACGGAAGT GGTGTATGCG GAAGGGTACC CCGACGAGCT TGCCATGGAG
ATGCTGAGCG AAACAGGCAT CATGGTGCGC AGGGTCGAGA TGTCTTCATA A
 
Protein sequence
MAETRHIERP SWDEYFMHLA FEVSKRSTCL RRAVGAVIVK DRRILATGYN GVPSGLRHCD 
ETGCLRQQLN VPSGQRHEIC RGLHAEQNAI IQAARYGIDI AGSSIYITTQ PCVVCTKMLI
NAGITEVVYA EGYPDELAME MLSETGIMVR RVEMSS