Gene Shel_21440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_21440 
Symbol 
ID8396033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2382138 
End bp2382749 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content58% 
IMG OID644986892 
ProductATP synthase, F0 subunit b 
Protein accessionYP_003144503 
Protein GI257064831 
COG category[C] Energy production and conversion 
COG ID[COG0711] F0F1-type ATP synthase, subunit b 
TIGRFAM ID[TIGR01144] ATP synthase, F0 subunit b 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACACGT ACACGAACAA GGTTCAGGGG CTCATCGGCA CCGCTGCTGT TTCCGCGGCT 
ACGGTTGTCG CCACCTGCCC GGTGTATGCA TTCGCTGCTG AGGAGGGTGG CATCGGCGCC
ATTCTTCCCA AGATGAATGA ATTCATCCCG ATGCTCGTCG CCTTCATCAT CCTGTGGATC
ATCCTTGCGA AATTCGGTTG GCCCATCTTC GACGGCATGC TTGAGAAGCG TGAGTCCACC
ATCCGCAACG ACCTCAAGAA CGCCGAGGAA GCTCGCATGG AAAGCGAGCG CATCCTTGCT
GAGTACAAGC AGCAGCTTGC CGAAGCAAAG GCCGAGGCTT CTCAGATCGT CGCGAATGCG
AAGAAGGCCG GCGAAGACGT CAAGGCCGAC ATTACGGCTA AGGCACAGGT TGAAGCCGAC
GGCATGATTG AAAAGGCCCG CGCCGCCATC GAGGCGGAGA AGAAGGCTGC CATTGCGGAT
CTCCAGGGTT CCGTGGCGGA CATCTCCGTC GAGGTCGCGT CCAAGGTCAT CGGCACCGAC
CTTTCGGATG ACGAGCACCG CGCTATCATC AAGCGCTATG TCGAAGAGGT AGGTAGCTTC
AATGCCAACT AA
 
Protein sequence
MNTYTNKVQG LIGTAAVSAA TVVATCPVYA FAAEEGGIGA ILPKMNEFIP MLVAFIILWI 
ILAKFGWPIF DGMLEKREST IRNDLKNAEE ARMESERILA EYKQQLAEAK AEASQIVANA
KKAGEDVKAD ITAKAQVEAD GMIEKARAAI EAEKKAAIAD LQGSVADISV EVASKVIGTD
LSDDEHRAII KRYVEEVGSF NAN