Gene Shel_21410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_21410 
Symbol 
ID8396030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2379086 
End bp2379997 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content59% 
IMG OID644986889 
ProductATP synthase, F1 gamma subunit 
Protein accessionYP_003144500 
Protein GI257064828 
COG category[C] Energy production and conversion 
COG ID[COG0224] F0F1-type ATP synthase, gamma subunit 
TIGRFAM ID[TIGR01146] ATP synthase, F1 gamma subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.740846 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAACC TGCACGATAT TGACAAGCGC ATAAAGTCGG TTTCCTCGAC GAAGCAGATT 
ACGCGCACCA TGGAAATGGT CGCAGGCGCG AAGGTGAAGC ATGCGAATGA TCGCATCGCT
GCATCCGAGC CCTACTCCAA CTCCATGTCC GAGATGCTTT CGGGCGTCGC GGAGCGCGTC
CAGCCGGGTG AGAACCCGCT GCTGTCGAAG CATGAGAGCA CCAAGCGCGT CCTGATGGTG
GCCGTGGTTT CCGACCGCGG TCTGGCAGGC GGCTTCAACT CGAACATTCT GCACTGCGTC
GAGAAGGCGA TTCGCGCGAA CAGCGCGCAG GGTATTGAGA CGGATGTCGT CGCTTGCGGC
AAAAAGGCTG GCGGTTTCTT CCGCTTCCGC AAGATAACCC CAGTTCTTGA GTACAAGGAC
CTTTCTGCCG ACCCTACGCT TGAAGAGGCG AACGAAATCG CCGAGTACGC CATCAAGGCG
TACACTGAGG GCAGCATCGA CGAAGTGGTG CTGGTCTACA ACCATTGCAA GAACGCTGCT
GAGCAGACCC TTGTGACGGA GACCATCCTG CCCGTCGATA CTACTGCCGC CAAAGAGGCG
CGCGCCAAGG CCGCCAAGGC CGATGTCGCC GCTACCGAGT CCGACGTTCC TGCGGGCATC
GAGTTCGAAC CTGAACCCGC TGACGTGTTG GCGAGCCTAC TGCCCGCCTA CCTGCGTGCT
TCGATCTACC ATGCGTTGAT CGACTCTGCA GCAGGGGAAC AGGCCGCTCG CCGTACTGCA
ATGCATTCGG CGACCGAGAA CGCGACCGAA ATGGTGGAAA CGCTGTCCAG GTTGTATAAC
CGTATACGTC AAGGTGCCAT CACCACTGAG ATTTCTGAAA TCGTTGGTGG CGCAGCAGCT
TTGGAGGAAT AA
 
Protein sequence
MPNLHDIDKR IKSVSSTKQI TRTMEMVAGA KVKHANDRIA ASEPYSNSMS EMLSGVAERV 
QPGENPLLSK HESTKRVLMV AVVSDRGLAG GFNSNILHCV EKAIRANSAQ GIETDVVACG
KKAGGFFRFR KITPVLEYKD LSADPTLEEA NEIAEYAIKA YTEGSIDEVV LVYNHCKNAA
EQTLVTETIL PVDTTAAKEA RAKAAKADVA ATESDVPAGI EFEPEPADVL ASLLPAYLRA
SIYHALIDSA AGEQAARRTA MHSATENATE MVETLSRLYN RIRQGAITTE ISEIVGGAAA
LEE